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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Sphingomonas paucimobilis"

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Search Summary

This query matches 103 Structures.

Refinements

Structure Determination Methodology

experimental (103)

Scientific Name of Source Organism

	Homo sapiens (26)
	Rhodnius prolixus (9)
	Rattus norvegicus (8)
	Mus musculus (7)
	Anopheles gambiae (4)
	Argas monolakensis (4)
	Escherichia coli (4)
	Gallus gallus (4)
	Pieris brassicae (4)
	Staphylococcus aureus (4)

More...

Taxonomy

	Eukaryota (72)
	Bacteria (25)
	Archaea (6)

Experimental Method

	X-RAY DIFFRACTION (91)
	SOLUTION NMR (12)

Polymer Entity Type

Protein (103)

Refinement Resolution (Å)

	0.5 - 1.0 (4)
	1.0 - 1.5 (17)
	1.5 - 2.0 (31)
	2.0 - 2.5 (29)
	2.5 - 3.0 (8)
	3.0 - 3.5 (1)
	3.5 - 4.0 (1)

Release Date

	2000 - 2004 (29)
	2005 - 2009 (71)
	2015 - 2019 (3)

Enzyme Classification Name

	Oxidoreductases (10)
	Lyases (4)

Membrane Protein Annotation

mpstruc (2)

Symmetry Type

	Asymmetric (73)
	Cyclic (29)
	Dihedral (8)

SCOP Classification

	All beta proteins (30)
	All alpha proteins (19)
	Alpha and beta proteins (a/b) (18)
	Artifacts (9)
	Alpha and beta proteins (a+b) (9)
	Peptides (1)

AllSelected

1 to 25 of 103 Structures

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1EJE \| pdb_00001eje	Download File View File

CRYSTAL STRUCTURE OF AN FMN-BINDING PROTEIN

Christendat, D., Saridakis, V., Bochkarev, A., Arrowsmith, C., Edwards, A.M., Northeast Structural Genomics Consortium (NESG)

(2000) Nat Struct Biol 7: 903-909

Released	2000-10-11
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	FMN-BINDING PROTEIN (protein)
Unique Ligands	FMN, NI, SO4

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1G13 \| pdb_00001g13	Download File View File

HUMAN GM2 ACTIVATOR STRUCTURE

Wright, C.S., Li, S.C., Rastinejad, F.

(2000) J Mol Biology 304: 411-422

Released	2001-04-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	GANGLIOSIDE M2 ACTIVATOR PROTEIN (protein)
Unique Ligands	EPE

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1I9B \| pdb_00001i9b	Download File View File

X-RAY STRUCTURE OF ACETYLCHOLINE BINDING PROTEIN (ACHBP)

Brejc, K., van Dijk, W.J., Klaassen, R., Schuurmans, M., van der Oost, J., Smit, A.B., Sixma, T.K.

(2001) Nature 411: 269-276

Released	2001-05-16
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Lymnaea stagnalis
Macromolecule	ACETYLCHOLINE BINDING PROTEIN (protein)
Unique Ligands	CA, EPE

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1KXO \| pdb_00001kxo	Download File View File

ENGINEERED LIPOCALIN DIGA16 : APO-FORM

Korndoerfer, I.P., Skerra, A.

(2003) J Mol Biology 330: 385-396

Released	2003-06-10
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Pieris brassicae
Macromolecule	DigA16 (protein)

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1LKE \| pdb_00001lke	Download File View File

ENGINEERED LIPOCALIN DIGA16 IN COMPLEX WITH DIGOXIGENIN

Korndoerfer, I.P., Skerra, A.

(2003) J Mol Biology 330: 385-396

Released	2003-06-17
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pieris brassicae
Macromolecule	DigA16 (protein)
Unique Ligands	DOG

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1LNM \| pdb_00001lnm	Download File View File

ANTICALIN DIGA16 IN COMPLEX WITH DIGITOXIGENIN

Korndoerfer, I.P., Skerra, A.

(2003) J Mol Biology 330: 385-396

Released	2003-06-17
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pieris brassicae
Macromolecule	DigA16 (protein)
Unique Ligands	DTX

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1MKY \| pdb_00001mky	Download File View File

Structural Analysis of the Domain Interactions in Der, a Switch Protein Containing Two GTPase Domains

Robinson, V.L., Hwang, J., Fox, E., Inouye, M., Stock, A.M.

(2002) Structure 10: 1649-1658

Released	2003-01-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thermotoga maritima
Macromolecule	Probable GTP-binding protein engA (protein)
Unique Ligands	GDP, PO4

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1ML7 \| pdb_00001ml7	Download File View File

Crystal structure of nitrophorin 4 complexed with 4-iodopyrazole

Berry, R.E., Ding, X.D., Weichsel, A., Montfort, W.R., Walker, F.A.

(2004) J Biol Inorg Chem 9: 135-144

Released	2002-09-20
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Rhodnius prolixus
Macromolecule	nitrophorin 4 (protein)
Unique Ligands	HEV, PYZ

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1NVL \| pdb_00001nvl	Download File View File

RDC-refined NMR structure of bovine Acyl-coenzyme A Binding Protein, ACBP, in complex with palmitoyl-coenzyme A

Lerche, M.H., Kragelund, B.B., Redfield, C., Poulsen, F.M.

(2003) To be published

Released	2004-05-11
Method	SOLUTION NMR
Organisms	Bos taurus
Macromolecule	Acyl-CoA-binding protein (protein)
Unique Ligands	COA, PLM

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1P9C \| pdb_00001p9c	Download File View File

NMR solution structure of the C-terminal ubiquitin-interacting motif of the proteasome subunit S5a

Mueller, T.D., Feigon, J.

(2003) EMBO J 22: 4634-4645

Released	2003-10-07
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	26S proteasome non-ATPase regulatory subunit 4 (protein)

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1PB7 \| pdb_00001pb7	Download File View File

CRYSTAL STRUCTURE OF THE NR1 LIGAND BINDING CORE IN COMPLEX WITH GLYCINE AT 1.35 ANGSTROMS RESOLUTION

Furukawa, H., Gouaux, E.

(2003) EMBO J 22: 2873-2885

Released	2003-06-24
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Rattus norvegicus
Macromolecule	N-methyl-D-aspartate Receptor Subunit 1 (protein)
Unique Ligands	GLY

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1PB8 \| pdb_00001pb8	Download File View File

CRYSTAL STRUCTURE OF THE NR1 LIGAND BINDING CORE IN COMPLEX WITH D-SERINE AT 1.45 ANGSTROMS RESOLUTION

Furukawa, H., Gouaux, E.

(2003) EMBO J 22: 2873-2885

Released	2003-06-24
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Rattus norvegicus
Macromolecule	N-methyl-D-aspartate Receptor Subunit 1 (protein)
Unique Ligands	DSN

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1PB9 \| pdb_00001pb9	Download File View File

CRYSTAL STRUCTURE OF THE NR1 LIGAND BINDING CORE IN COMPLEX WITH D-CYCLOSERINE AT 1.60 ANGSTROMS RESOLUTION

Furukawa, H., Gouaux, E.

(2003) EMBO J 22: 2873-2885

Released	2003-06-24
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Rattus norvegicus
Macromolecule	N-methyl-D-aspartate Receptor Subunit 1 (protein)
Unique Ligands	4AX

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1PBQ \| pdb_00001pbq	Download File View File

CRYSTAL STRUCTURE OF THE NR1 LIGAND BINDING CORE IN COMPLEX WITH 5,7-DICHLOROKYNURENIC ACID (DCKA) AT 1.90 ANGSTROMS RESOLUTION

Furukawa, H., Gouaux, E.

(2003) EMBO J 22: 2873-2885

Released	2003-07-29
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rattus norvegicus
Macromolecule	N-methyl-D-aspartate Receptor Subunit 1 (protein)
Unique Ligands	DK1

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1QFT \| pdb_00001qft	Download File View File

HISTAMINE BINDING PROTEIN FROM FEMALE BROWN EAR RHIPICEPHALUS APPENDICULATUS

Paesen, G.C., Adams, P.L., Harlos, K., Nuttal, P.A., Stuart, D.I.

(1999) Mol Cell 3: 661-671

Released	2000-04-19
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Rhipicephalus appendiculatus
Macromolecule	PROTEIN (FEMALE-SPECIFIC HISTAMINE BINDING PROTEIN 2) (protein)
Unique Ligands	HSM

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1QFV \| pdb_00001qfv	Download File View File

HISTAMINE BINDING PROTEIN FROM FEMALE BROWN EAR RHIPICEPHALUS APPENDICULATUS

Paesen, G.C., Adams, P.L., Harlos, K., Nuttal, P.A., Stuart, D.I.

(1999) Mol Cell 3: 661-671

Released	2000-04-19
Method	X-RAY DIFFRACTION 1.36 Å
Organisms	Rhipicephalus appendiculatus
Macromolecule	PROTEIN (FEMALE-SPECIFIC HISTAMINE BINDING PROTEIN 2) (protein)
Unique Ligands	HSM

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1S99 \| pdb_00001s99	Download File View File

The structure and function of B. subtilis YkoF gene product: ligand free protein

Devedjiev, Y., Surendranath, Y., Derewenda, U., Derewenda, Z.S.

(2004) J Mol Biology 343: 395-406

Released	2004-10-05
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Bacillus subtilis
Macromolecule	ykoF (protein)
Unique Ligands	ACT, CA

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1SBR \| pdb_00001sbr	Download File View File

The structure and function of B. subtilis YkoF gene product: the complex with thiamin

Devedjiev, Y., Surendranath, Y., Derewenda, U., Derewenda, Z.S.

(2004) J Mol Biology 343: 395-406

Released	2004-10-05
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Bacillus subtilis
Macromolecule	ykoF (protein)
Unique Ligands	CA, VIB

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1T0V \| pdb_00001t0v	Download File View File

NMR Solution Structure of the Engineered Lipocalin FluA(R95K) Northeast Structural Genomics Target OR17

Mills, J.L., Liu, G., Skerra, A., Szyperski, T., Northeast Structural Genomics Consortium (NESG)

(2009) Biochemistry 48: 7411-7419

Released	2005-06-14
Method	SOLUTION NMR
Organisms	Pieris brassicae
Macromolecule	BILIN-BINDING PROTEIN (protein)

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1TV7 \| pdb_00001tv7	Download File View File

Structure of the S-adenosylmethionine dependent Enzyme MoaA

Haenzelmann, P., Schindelin, H.

(2004) Proc Natl Acad Sci U S A 101: 12870-12875

Released	2004-08-31
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Staphylococcus aureus
Macromolecule	Molybdenum cofactor biosynthesis protein A (protein)
Unique Ligands	SF4, SO4

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1TV8 \| pdb_00001tv8	Download File View File

Structure of MoaA in complex with S-adenosylmethionine

Haenzelmann, P., Schindelin, H.

(2004) Proc Natl Acad Sci U S A 101: 12870-12875

Released	2004-08-31
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Staphylococcus aureus
Macromolecule	Molybdenum cofactor biosynthesis protein A (protein)
Unique Ligands	DTU, SAM, SF4, SO4