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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "PA52Ts2_3638"

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Search Summary

This query matches 73 Structures.

Refinements

Structure Determination Methodology

experimental (73)

Scientific Name of Source Organism

	Homo sapiens (22)
	Lama glama (8)
	Flavobacteriaceae bacterium SA-0082 (7)
	Escherichia coli (6)
	Pseudomonas (5)
	Inovirus M13 (3)
	Middle East respiratory syndrome-related coronavirus (2)
	Monkeypox virus (2)
	Mus musculus (2)
	Mycobacterium tuberculosis H37Rv (2)

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Taxonomy

	Bacteria (36)
	Eukaryota (33)
	Riboviria (5)
	Monodnaviria (3)
	Varidnaviria (3)
	Archaea (1)
	Duplodnaviria (1)
	unclassified sequences (1)

Experimental Method

	X-RAY DIFFRACTION (51)
	ELECTRON MICROSCOPY (22)

Polymer Entity Type

	Protein (73)
	RNA (5)
	DNA (3)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (22)
	2.0 - 2.5 (14)
	2.5 - 3.0 (15)
	3.0 - 3.5 (14)
	3.5 - 4.0 (5)
	4.0 - 4.5 (1)

Release Date

	2015 - 2019 (3)
	2020 - 2024 (64)
	2025 - 2029 (6)

Enzyme Classification Name

	Hydrolases (24)
	Transferases (10)
	Lyases (7)
	Oxidoreductases (3)
	Isomerases (1)

Membrane Protein Annotation

	mpstruc (8)
	PDBTM (6)
	MemProtMD (3)

Symmetry Type

	Asymmetric (49)
	Cyclic (21)
	Dihedral (2)
	Helical (1)

SCOP Classification

	All alpha proteins (1)
	All beta proteins (1)

AllSelected

1 to 25 of 73 Structures

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5EBG \| pdb_00005ebg	Download File View File

Crystal structure of bovine CD8aa homodimer

Liu, Y., Li, X., Zhang, N., Qi, J., Xia, C.

(2016) Sci Rep 6: 24788-24788

Released	2016-09-14
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bos taurus
Macromolecule	T-cell surface glycoprotein CD8 alpha chain (protein)

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6A2D \| pdb_00006a2d	Download File View File

Crystal structure of a synthase 2 from santalum album in complex with ligand1

Han, X., Ko, T.P., Liu, W.D., Zheng, Y.Y., Chen, C.C., Guo, R.T.

To be published

Released	2019-06-12
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Santalum album
Macromolecule	Sesquisabinene B synthase 2 (protein)
Unique Ligands	6R2, MG

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6JDK \| pdb_00006jdk	Download File View File

Crystal structure of Baeyer-Villiger monooxygenase from Parvibaculum lavamentivorans

Kim, J.-S., Nguyen, T.D.

(2019) Biochem Biophys Res Commun 512: 564-570

Released	2019-04-10
Method	X-RAY DIFFRACTION 2.495 Å
Organisms	Parvibaculum lavamentivorans DS-1
Macromolecule	Baeyer-Villiger monooxygenase (protein)
Unique Ligands	FAD, MG

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6NYR \| pdb_00006nyr	Download File View File

The crystal structure of CroV588 a novel circular LRR protein structure

Huyton, T., Jaiswal, M., Gorlich, D.

To be published

Released	2020-08-12
Method	X-RAY DIFFRACTION 2.431 Å
Organisms	Rheavirus
Macromolecule	Crov588 (protein)
Unique Ligands	GOL

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6R00 \| pdb_00006r00	Download File View File

OphA DeltaC6 V404F complex with SAH

Song, H., Naismith, J.H.

(2020) ACS Chem Biol 15: 1901-1912

Released	2020-04-01
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Omphalotus olearius
Macromolecule	PHE-PRO-TRP-MVA-ILE-MVA-PHE-GLY-VAL-ILE-GLY-VAL-ILE-GLY (protein) Peptide N-methyltransferase (protein)
Unique Ligands	SAH

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7P49 \| pdb_00007p49	Download File View File

HLA-E*01:03 in complex with Mtb14

Walters, L.C., Gillespie, G.M.

(2022) Cell Rep 39: 110959-110959

Released	2022-06-22
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens Mycobacterium tuberculosis H37Rv
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, alpha chain E (protein) Phenolphthiocerol/phthiocerol polyketide synthase subunit B (protein)
Unique Ligands	GOL, SO4, ZN

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7P4B \| pdb_00007p4b	Download File View File

HLA-E*01:03 in complex with IL9

Walters, L.C., Gillespie, G.M.

(2022) Cell Rep 39: 110959-110959

Released	2022-07-27
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Homo sapiens Mycobacterium tuberculosis H37Rv
Macromolecule	Beta-2-microglobulin (protein) ESAT-6-like protein EsxH (protein) HLA class I histocompatibility antigen, alpha chain E (protein)
Unique Ligands	GOL, PO4, SO4, ZN

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7PDA \| pdb_00007pda	Download File View File

Crystal structure of Phenazine 1-carboxylic acid decarboxylase from Mycobacterium fortuitum

Gahloth, D., Leys, D.

To be published

Released	2022-08-24
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Mycolicibacterium fortuitum unidentified
Macromolecule	UNK (protein) UbiD family decarboxylase (protein)
Unique Ligands	4LU, MN, NA

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7RDU \| pdb_00007rdu	Download File View File

Crystal structure of Campylobacter jejuni keto said reductoisomerase in complex with magnesium and oxidixized and reduced NADPH

Guddat, L.W., You, L.

To be published

Released	2022-07-13
Method	X-RAY DIFFRACTION 2.502 Å
Organisms	Campylobacter jejuni RM1221
Macromolecule	Ketol-acid reductoisomerase (NADP(+)) (protein)
Unique Ligands	MG, NAP, NDP

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7S9G \| pdb_00007s9g	Download File View File

Room-temperature Human Hsp90a-NTD bound to BIIB021

Stachowski, T.R., Vanarotti, M., Fischer, M.

(2022) Angew Chem Int Ed Engl 61: e202112919-e202112919

Released	2022-08-03
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Homo sapiens
Macromolecule	Heat shock protein HSP 90-alpha (protein)
Unique Ligands	94M, MG

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7T3J \| pdb_00007t3j	Download File View File

Cryo-EM structure of Csy-AcrIF24

Mukherjee, I.A., Chang, L.

(2022) Nat Chem Biol 18: 1417-1424

Released	2022-09-21
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Pseudomonas
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 1

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7T3K \| pdb_00007t3k	Download File View File

Cryo-EM structure of Csy-AcrIF24 dimer

Mukherjee, I.A., Chang, L.

(2022) Nat Chem Biol 18: 1417-1424

Released	2022-09-21
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Pseudomonas
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 1

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7T3L \| pdb_00007t3l	Download File View File

Cryo-EM structure of Csy-AcrIF24-DNA dimer

Mukherjee, I.A., Chang, L.

(2022) Nat Chem Biol 18: 1417-1424

Released	2022-09-21
Method	ELECTRON MICROSCOPY 3.6 Å
Organisms	Escherichia Pseudomonas
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 3

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7T8M \| pdb_00007t8m	Download File View File

Co-crystal structure of SARS-CoV-2 Mpro C145A with substrate peptide 5/6

Shaqra, A.M., Schiffer, C.A.

(2022) Nat Commun 13: 3556-3556

Released	2022-06-22
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Escherichia coli Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein) Nonstructural protein 5/6 (protein)
Unique Ligands	DMS, GOL

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7T8R \| pdb_00007t8r	Download File View File

Co-crystal structure of SARS-CoV-2 Mpro C145A with substrate peptide 7/8

Shaqra, A.M., Schiffer, C.A.

(2022) Nat Commun 13: 3556-3556

Released	2022-06-22
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein) Nonstructural protein 7/8 (protein)
Unique Ligands	EDO, GOL

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7TAW \| pdb_00007taw	Download File View File

Cryo-EM structure of the Csy-AcrIF24-promoter DNA dimer

Mukherjee, I.A., Chang, L.

(2022) Nat Chem Biol 18: 1417-1424

Released	2022-09-21
Method	ELECTRON MICROSCOPY 2.7 Å
Organisms	Pseudomonas
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 3

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7TAX \| pdb_00007tax	Download File View File

Cryo-EM structure of the Csy-AcrIF24-promoter DNA complex

Mukherjee, I.A., Chang, L.

(2022) Nat Chem Biol 18: 1417-1424

Released	2022-09-21
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Pseudomonas
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 3

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7UHE \| pdb_00007uhe	Download File View File

Taf14 ET domain in complex with C-terminal tail of Taf2

Klein, B.J., Kutateladze, T.G.

(2022) Nat Commun 13: 3177-3177

Released	2022-08-17
Method	X-RAY DIFFRACTION 1.66 Å
Organisms	Saccharomyces
Macromolecule	C-terminal tail of Transcription initiation factor TFIID subunit 2 (protein) Transcription initiation factor TFIID subunit 14 (protein)

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7WEK \| pdb_00007wek	Download File View File

Crystal structure of the mouse Wdr47 NTD in complex with the WBR motif form Camsap3.

Ren, J.Q., Li, D., Feng, W.

(2022) Cell Rep 41: 111589-111589

Released	2022-11-30
Method	X-RAY DIFFRACTION 3.21 Å
Organisms	Mus musculus
Macromolecule	WBR motif form Calmodulin-regulated spectrin-associated protein 3 (protein) WD repeat-containing protein 47 (protein)

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7WQU \| pdb_00007wqu	Download File View File

FeoC from Klebsiella pneumoniae

Hsueh, K.L., Yu, L.K., Hsieh, Y.C., Hsiao, Y.Y., Chen, C.J.

(2023) Biochim Biophys Acta Proteins Proteom 1871: 140855-140855

Released	2023-02-01
Method	X-RAY DIFFRACTION 4.202 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Ferrous iron transport protein B (protein) Probable [Fe-S]-dependent transcriptional repressor (protein)