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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Geng, Q."

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Search Summary

This query matches 117 Structures.

Refinements

Structure Determination Methodology

experimental (117)

Scientific Name of Source Organism

	Pseudomonas aeruginosa UCBPP-PA14 (117)
	Pseudomonas aeruginosa (8)
	Pseudomonas phage JBD30 (4)
	Casadabanvirus D3112 (2)
	Casadabanvirus DMS3 (2)
	Pseudomonas aeruginosa PAO1 (2)
	Pseudomonas phage JBD5 (2)
	Vibrio cholerae O1 biovar El Tor str. N16961 (2)
	Alcanivorax sp. KX64203 (1)
	Shewanella xiamenensis (1)

More...

Taxonomy

	Bacteria (117)
	Duplodnaviria (9)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (106)
	ELECTRON MICROSCOPY (10)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (117)
	RNA (14)
	DNA (5)

Refinement Resolution (Å)

	1.0 - 1.5 (7)
	1.5 - 2.0 (44)
	2.0 - 2.5 (28)
	2.5 - 3.0 (19)
	3.0 - 3.5 (11)
	3.5 - 4.0 (3)
	4.0 - 4.5 (3)
	> 4.5 (1)

Release Date

	2005 - 2009 (3)
	2010 - 2014 (30)
	2015 - 2019 (58)
	2020 - 2024 (25)
	2025 - 2029 (1)

Enzyme Classification Name

	Hydrolases (19)
	Transferases (9)
	Oxidoreductases (4)
	Translocases (2)

Symmetry Type

	Cyclic (75)
	Asymmetric (34)
	Dihedral (8)

SCOP Classification

	Alpha and beta proteins (a/b) (41)
	Artifacts (19)
	All beta proteins (8)
	All alpha proteins (2)
	Alpha and beta proteins (a+b) (3)
	Multi-domain proteins (alpha and beta) (1)

AllSelected

1 to 25 of 117 Structures

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2FE7 \| pdb_00002fe7	Download File View File

The crystal structure of a probable N-acetyltransferase from Pseudomonas aeruginosa

Zhang, R., Xu, X., Zheng, H., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2006-01-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	probable N-acetyltransferase (protein)

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2M3V \| pdb_00002m3v	Download File View File

Solution structure of tyrosine phosphatase related to biofilm formation A (TpbA) from Pseudomonas aeruginosa

Koveal, D., Peti, W., Page, R.

(2013) J Mol Biology 425: 2219-2231

Released	2013-04-03
Method	SOLUTION NMR
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Putative uncharacterized protein (protein)

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2XLI \| pdb_00002xli	Download File View File

Crystal structure of the Csy4-crRNA complex, monoclinic form

Haurwitz, R.E., Jinek, M., Wiedenheft, B., Zhou, K., Doudna, J.A.

(2010) Science 329: 1355

Released	2010-09-22
Method	X-RAY DIFFRACTION 2.33 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	CSY4 ENDORIBONUCLEASE (protein) 5'-R(CPUPGPCPCPGPUPAPUPAPGPGPCPADGC)-3' (nucleic acid)

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2XLJ \| pdb_00002xlj	Download File View File

Crystal structure of the Csy4-crRNA complex, hexagonal form

Haurwitz, R.E., Jinek, M., Wiedenheft, B., Zhou, K., Doudna, J.A.

(2010) Science 329: 1355

Released	2010-09-22
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	CSY4 ENDORIBONUCLEASE (protein) 5'-R(CPUPGPCPCPGPUPAPUPAPGPGPCPADGC)-3' (nucleic acid)

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2XLK \| pdb_00002xlk	Download File View File

Crystal structure of the Csy4-crRNA complex, orthorhombic form

Haurwitz, R.E., Jinek, M., Wiedenheft, B., Zhou, K., Doudna, J.A.

(2010) Science 329: 1355

Released	2010-09-22
Method	X-RAY DIFFRACTION 1.805 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	CSY4 ENDORIBONUCLEASE (protein) 5'-R(CPUPGPCPCPGPUPAPUPAPGPGPCPADGC)-3' (nucleic acid)

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3FD9 \| pdb_00003fd9	Download File View File

Crystal Structure of the transcriptional anti-activator ExsD from Pseudomonas aeruginosa

Schubot, F.D.

(2009) Protein Sci 18: 503-513

Released	2009-06-23
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Uncharacterized protein (protein)

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3GOD \| pdb_00003god	Download File View File

Structural basis for DNase activity of a conserved protein implicated in CRISPR-mediated antiviral defense

Wiedenheft, B.

(2009) Structure 17: 904-912

Released	2009-06-30
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Cas1 (protein)
Unique Ligands	CA, MN, NA

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3JYB \| pdb_00003jyb	Download File View File

Crystal Structure of the RetS periplasmic domain

Jing, X., Schubot, F.D., Robinson, H.

(2010) Proteins 78: 1631-1640

Released	2010-02-16
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Sensor protein (protein)

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3KD2 \| pdb_00003kd2	Download File View File

Crystal structure of the CFTR inhibitory factor Cif

Bahl, C.D., Madden, D.R.

(2010) J Bacteriol 192: 1785-1795

Released	2010-01-26
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	CFTR inhibitory factor (Cif) (protein)

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3KDA \| pdb_00003kda	Download File View File

Crystal structure of the CFTR inhibitory factor Cif with the H269A mutation

Bahl, C.D., Madden, D.R.

(2010) J Bacteriol 192: 1785-1795

Released	2010-01-26
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	CFTR inhibitory factor (Cif) (protein)

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3PI6 \| pdb_00003pi6	Download File View File

Crystal structure of the CFTR inhibitory factor Cif with the H177Y mutation

Bahl, C.D., Madden, D.R.

(2012) Protein Pept Lett 19: 186-193

Released	2011-09-21
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	hydrolase (protein)

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4AL6 \| pdb_00004al6	Download File View File

Crystal structure of the S148ACsy4-crRNA complex

Haurwitz, R.E., Sternberg, S.H., Doudna, J.A.

(2012) EMBO J 31: 2824

Released	2012-06-13
Method	X-RAY DIFFRACTION 2.63 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	CSY4 ENDORIBONUCLEASE (protein) CRRNA, 5'-R(CPUPGPCPCPGPUPAPUPAPGPGP CPAPGP*C)-3' (nucleic acid)

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4DLN \| pdb_00004dln	Download File View File

Crystal structure of the CFTR inhibitory factor Cif with the D129S mutation

Bahl, C.D., Amacher, J.F., Madden, D.R.

(2015) Angew Chem Int Ed Engl 54: 9881-9885

Released	2013-08-07
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Putative hydrolase (protein)

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4DM7 \| pdb_00004dm7	Download File View File

Crystal structure of the CFTR inhibitory factor Cif with the E153D mutation

Bahl, C.D., Madden, D.R.

(2015) Angew Chem Int Ed Engl 54: 9881-9885

Released	2013-08-07
Method	X-RAY DIFFRACTION 1.36 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Putative hydrolase (protein)

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4DMC \| pdb_00004dmc	Download File View File

Crystal structure of the CFTR inhibitory factor Cif with the E153Q mutation

Bahl, C.D., Madden, D.R.

(2016) Biochemistry 55: 788-797

Released	2013-08-07
Method	X-RAY DIFFRACTION 1.66 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Putative hydrolase (protein)

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4DMF \| pdb_00004dmf	Download File View File

Crystal structure of the CFTR inhibitory factor Cif with the H177A mutation

Bahl, C.D., Madden, D.R.

(2015) Angew Chem Int Ed Engl 54: 9881-9885

Released	2013-08-07
Method	X-RAY DIFFRACTION 2.12 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Putative hydrolase (protein)

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4DMH \| pdb_00004dmh	Download File View File

Crystal structure of the CFTR inhibitory factor Cif with the H207A mutation

Bahl, C.D., Madden, D.R.

(2015) Angew Chem Int Ed Engl 54: 9881-9885

Released	2013-08-07
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Putative hydrolase (protein)
Unique Ligands	GOL

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4DMK \| pdb_00004dmk	Download File View File

Crystal structure of the CFTR inhibitory factor Cif with the Y239F mutation

Bahl, C.D., Madden, D.R.

(2015) Angew Chem Int Ed Engl 54: 9881-9885

Released	2013-08-07
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Putative hydrolase (protein)
Unique Ligands	GOL

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4DMZ \| pdb_00004dmz	Download File View File

PelD 156-455 from Pseudomonas aeruginosa PA14, apo form

Whitney, J.C., Colvin, K.M., Marmont, L.S., Robinson, H., Parsek, M.R., Howell, P.L.

(2012) J Biological Chem 287: 23582-23593

Released	2012-05-23
Method	X-RAY DIFFRACTION 2.102 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Putative uncharacterized protein pelD (protein)
Unique Ligands	EDO, MG, TRS

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4DN0 \| pdb_00004dn0	Download File View File

PelD 156-455 from Pseudomonas aeruginosa PA14 in complex with c-di-GMP

Whitney, J.C., Colvin, K.M., Marmont, L.S., Robinson, H., Parsek, M.R., Howell, P.L.

(2012) J Biological Chem 287: 23582-23593

Released	2012-05-23
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Putative uncharacterized protein pelD (protein)
Unique Ligands	C2E, NA, SO4

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4DNF \| pdb_00004dnf	Download File View File

Crystal structure of the CFTR inhibitory factor Cif with the E153Q mutation adducted with the epibromohydrin hydrolysis intermediate

Bahl, C.D., Madden, D.R.

(2016) Biochemistry 55: 788-797

Released	2013-08-07
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Putative hydrolase (protein)
Unique Ligands	EBH

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4DNO \| pdb_00004dno	Download File View File

Crystal structure of the CFTR inhibitory factor Cif with the E153Q mutation adducted with the 1,2-epoxyhexane hydrolysis intermediate

Bahl, C.D., Patankar, Y.R., Madden, D.R.

(2016) Biochemistry 55: 788-797

Released	2013-08-07
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Putative hydrolase (protein)
Unique Ligands	7FB

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4EHB \| pdb_00004ehb	Download File View File

Crystal structure of the CFTR inhibitory factor Cif with the D129S mutation bound to epoxyhexane

Hvorecny, K.L., Bahl, C.D., Madden, D.R.

(2016) Biochemistry 55: 788-797

Released	2013-08-07
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Putative hydrolase (protein)
Unique Ligands	0PZ

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4EUS \| pdb_00004eus	Download File View File

Crystal structure of the CFTR inhibitory factor Cif bound to 1,2-hexanediol

Bahl, C.D., Madden, D.R.

(2016) Biochemistry 55: 788-797

Released	2013-08-07
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Putative hydrolase (protein)
Unique Ligands	0RE

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4IJJ \| pdb_00004ijj	Download File View File

Structure of transcription factor DksA2 from Pseudomonas aeruginosa

Biswas, T., Furman, R., Artsimovitch, I., Tsodikov, O.V.

(2013) FEBS Lett 587: 614-619

Released	2013-02-27
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Putative C4-type zinc finger protein, DksA/TraR family (protein)
Unique Ligands	SO4

1 to 25 of 117 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2FE7 | pdb_00002fe7

2M3V | pdb_00002m3v

2XLI | pdb_00002xli

2XLJ | pdb_00002xlj

2XLK | pdb_00002xlk

3FD9 | pdb_00003fd9

3GOD | pdb_00003god

3JYB | pdb_00003jyb

3KD2 | pdb_00003kd2

3KDA | pdb_00003kda

3PI6 | pdb_00003pi6

4AL6 | pdb_00004al6

4DLN | pdb_00004dln

4DM7 | pdb_00004dm7

4DMC | pdb_00004dmc

4DMF | pdb_00004dmf

4DMH | pdb_00004dmh

4DMK | pdb_00004dmk

4DMZ | pdb_00004dmz

4DN0 | pdb_00004dn0

4DNF | pdb_00004dnf

4DNO | pdb_00004dno

4EHB | pdb_00004ehb

4EUS | pdb_00004eus

4IJJ | pdb_00004ijj