8X8I

The structure of AbBioc in complex with SAM cofactor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.54 Å
  • R-Value Free: 0.287 
  • R-Value Work: 0.236 
  • R-Value Observed: 0.239 

Starting Model: in silico
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wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

A bacterial methyltransferase that initiates biotin synthesis, an attractive anti-ESKAPE druggable pathway.

Su, Z.Zhang, W.Z.Shi, Y.Cui, T.Xu, Y.C.Yang, R.S.Huang, M.Zhou, C.Zhang, H.M.Lu, T.Qu, J.X.He, Z.G.Gan, J.Feng, Y.J.

(2024) Sci Adv 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Malonyl-[acyl-carrier protein] O-methyltransferase
A, B, C, D
249Acinetobacter baumanniiMutation(s): 0 
Gene Names: bioC
EC: 2.1.1.197
UniProt
Find proteins for A0A1E3M3A7 (Acinetobacter baumannii)
Explore A0A1E3M3A7 
Go to UniProtKB:  A0A1E3M3A7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A1E3M3A7
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.54 Å
  • R-Value Free: 0.287 
  • R-Value Work: 0.236 
  • R-Value Observed: 0.239 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 71.055α = 90
b = 57.23β = 101.72
c = 143.671γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
autoPROCdata reduction
Aimlessdata scaling
PHASERphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Key Reserch & Development Program of ChinaChina2023YFC2307100

Revision History  (Full details and data files)

  • Version 1.0: 2024-11-13
    Type: Initial release