8J7S | pdb_00008j7s

Structure of the SPARTA complex

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.84 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history. 


Literature

Cryo-EM structure of the ssDNA-activated SPARTA complex.

Guo, M., Zhu, Y., Lin, Z., Yang, D., Zhang, A., Guo, C., Huang, Z.

(2023) Cell Res 33: 731-734


Macromolecules

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(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Piwi domain-containing protein
A, E, I, M
506Maribacter polysiphoniaeMutation(s): 0 
Gene Names: LX92_01809
UniProt
Find proteins for A0A316E3U6 (Maribacter polysiphoniae)
Explore A0A316E3U6 
Go to UniProtKB:  A0A316E3U6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A316E3U6
Sequence Annotations
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  • Reference Sequence
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
TIR domain-containing protein
B, F, J, N
418Maribacter polysiphoniaeMutation(s): 0 
Gene Names: LX92_01810
UniProt
Find proteins for A0A316E683 (Maribacter polysiphoniae)
Explore A0A316E683 
Go to UniProtKB:  A0A316E683
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A316E683
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.84 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX1.20_4459:

Structure Validation

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View more in-depth experimental data
Entry History & Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China31825008, 31422014, U21A20276,

Revision History  (Full details and data files)

  • Version 1.0: 2024-03-06
    Type: Initial release