3KHY

Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Free: 
    0.193 (Depositor), 0.199 (DCC) 
  • R-Value Work: 
    0.155 (Depositor), 0.166 (DCC) 
  • R-Value Observed: 
    0.155 (Depositor) 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history. 


Literature

Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4

Brunzelle, J.S., Sharma, S.S., Skarina, T., Wang, Y., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Macromolecules
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(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Propionate kinase
A, B
384Francisella tularensis subsp. tularensisMutation(s): 0 
Gene Names: FTT1753, FTT_1753, tdcD
EC: 2.7.2 (PDB Primary Data), 2.7.2.1 (UniProt)
UniProt
Find proteins for Q5NE95 (Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4))
Explore Q5NE95 
Go to UniProtKB:  Q5NE95
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5NE95
Sequence Annotations
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  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Free:  0.193 (Depositor), 0.199 (DCC) 
  • R-Value Work:  0.155 (Depositor), 0.166 (DCC) 
  • R-Value Observed: 0.155 (Depositor) 
Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 67.079α = 90
b = 87.127β = 90
c = 149.661γ = 90
Software Package:
Software NamePurpose
BLU-MAXdata collection
PHENIXmodel building
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
PHENIXphasing

Structure Validation

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View more in-depth experimental data
Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2010-01-19
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2014-10-01
    Changes: Database references, Structure summary
  • Version 1.3: 2024-10-30
    Changes: Data collection, Database references, Derived calculations, Structure summary