2IA2 | pdb_00002ia2

The crystal structure of a putative transcriptional regulator RHA06195 from Rhodococcus sp. RHA1

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 
    0.223 (Depositor), 0.190 (DCC) 
  • R-Value Work: 
    0.186 (Depositor), 0.200 (DCC) 
  • R-Value Observed: 
    0.188 (Depositor) 

wwPDB Validation   3D Report Full Report


This is version 1.5 of the entry. See complete history. 


Literature

The crystal structure of a putative transcriptional regulator RHA06195 from Rhodococcus sp. RHA1

Cymborowski, M.T., Chruszcz, M., Skarina, T., Onopriyenko, O., Savchenko, A., Edwards, A., Minor, W.

To be published.

Macromolecules
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Putative Transcriptional Regulator
A, B, C, D
265Rhodococcus jostii RHA1Mutation(s): 4 
UniProt
Find proteins for Q0SH23 (Rhodococcus jostii (strain RHA1))
Explore Q0SH23 
Go to UniProtKB:  Q0SH23
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ0SH23
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free:  0.223 (Depositor), 0.190 (DCC) 
  • R-Value Work:  0.186 (Depositor), 0.200 (DCC) 
  • R-Value Observed: 0.188 (Depositor) 
Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 60.892α = 90
b = 121.526β = 90
c = 174.259γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
HKL-2000data collection
HKL-2000data reduction
HKL-2000data scaling
HKL-3000phasing
SHELXDphasing
SHELXEmodel building
MLPHAREphasing
DMphasing
CCP4phasing
SOLVEphasing
RESOLVEphasing
ARP/wARPmodel building
Cootmodel building
Omodel building

Structure Validation

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View more in-depth experimental data
Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2006-10-10
    Type: Initial release
  • Version 1.1: 2008-05-01
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Source and taxonomy, Version format compliance
  • Version 1.3: 2011-10-05
    Changes: Structure summary
  • Version 1.4: 2022-04-13
    Changes: Database references, Derived calculations, Structure summary
  • Version 1.5: 2024-11-13
    Changes: Data collection, Refinement description, Structure summary