Download MendeleyCarbonmonoxy-Haemoglobin at 1.25 A Resolution
Park, S.-Y., Tame, J.R.H.To be published.
1IRD | pdb_00001ird
Crystal Structure of Human Carbonmonoxy-Haemoglobin at 1.25 A Resolution
- PDB DOI: https://doi.org/10.2210/pdb1IRD/pdb
- Classification: OXYGEN STORAGE/TRANSPORT
- Organism(s): Homo sapiens
- Mutation(s): No
- Deposited: 2001-09-27 Released: 2001-10-17
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.25 Å
- R-Value Free: 0.214 (Depositor)
- R-Value Work: 0.163 (Depositor)
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.6 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hemoglobin alpha chain | 141 | Homo sapiens | Mutation(s): 0 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P69905 (Homo sapiens) Explore P69905 Go to UniProtKB: P69905 | |||||
PHAROS: P69905 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P69905 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hemoglobin beta chain | 146 | Homo sapiens | Mutation(s): 0 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P68871 (Homo sapiens) Explore P68871 Go to UniProtKB: P68871 | |||||
PHAROS: P68871 GTEx: ENSG00000244734 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P68871 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| HEM Query on HEM | C [auth A], E [auth B] | PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L |  | ||
| CMO Query on CMO | D [auth A], F [auth B] | CARBON MONOXIDE C O UGFAIRIUMAVXCW-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.25 Å
- R-Value Free: 0.214 (Depositor)
- R-Value Work: 0.163 (Depositor)
Space Group: P 41 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 53.27 | α = 90 |
| b = 53.27 | β = 90 |
| c = 190.78 | γ = 90 |
| Software Name | Purpose |
|---|---|
| X-PLOR | model building |
| SHELXL-97 | refinement |
| MOSFLM | data reduction |
| CCP4 | data scaling |
| X-PLOR | phasing |
Entry History
Deposition Data
- Released Date: 2001-10-17 Deposition Author(s): Park, S.-Y., Tame, J.R.H.
Revision History (Full details and data files)
- Version 1.0: 2001-10-17
Type: Initial release - Version 1.1: 2008-04-27
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2019-07-24
Changes: Advisory, Data collection, Derived calculations - Version 1.4: 2019-08-21
Changes: Data collection, Derived calculations - Version 1.5: 2022-07-06
Changes: Database references, Derived calculations - Version 1.6: 2023-10-25
Changes: Data collection, Refinement description
