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235,666 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Methanothermobacter"

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Search Summary

This query matches 358 Structures.

Refinements

Structure Determination Methodology

experimental (358)

Scientific Name of Source Organism

	Methanothermobacter thermautotrophicus str. Delta H (168)
	Methanothermobacter thermautotrophicus (147)
	Methanothermobacter marburgensis str. Marburg (23)
	Methanothermobacter marburgensis (11)
	Methanothermobacter wolfeii (5)
	Methanothermobacter (2)
	Methanothermobacter sp. CaT2 (2)
	Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (2)
	Saccharomyces cerevisiae (1)
	synthetic construct (1)

Taxonomy

	Archaea (358)
	Eukaryota (1)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (301)
	SOLUTION NMR (33)
	ELECTRON MICROSCOPY (24)

Polymer Entity Type

	Protein (358)
	DNA (10)
	RNA (3)

Refinement Resolution (Å)

	1.0 - 1.5 (80)
	1.5 - 2.0 (103)
	2.0 - 2.5 (64)
	2.5 - 3.0 (37)
	3.0 - 3.5 (25)
	3.5 - 4.0 (6)
	4.0 - 4.5 (1)
	> 4.5 (9)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (85)
	2005 - 2009 (66)
	2010 - 2014 (139)
	2015 - 2019 (24)
	2020 - 2024 (40)
	2025 - 2029 (3)

Enzyme Classification Name

	Lyases (130)
	Transferases (47)
	Oxidoreductases (21)
	Hydrolases (29)
	Translocases (3)
	Ligases (7)
	Isomerases (2)

Membrane Protein Annotation

	PDBTM (32)
	mpstruc (36)
	MemProtMD (22)
	OPM (11)

Symmetry Type

	Cyclic (246)
	Asymmetric (79)
	Dihedral (51)
	Tetrahedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (172)
	Alpha and beta proteins (a+b) (79)
	All alpha proteins (38)
	Artifacts (41)
	All beta proteins (19)
	Membrane and cell surface proteins and peptides (3)
	Small proteins (2)

AllSelected

1 to 25 of 358 Structures

Page 1 of 15

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1DV7 \| pdb_00001dv7	Download File View File

CRYSTAL STRUCTURE OF OROTIDINE MONOPHOSPHATE DECARBOXYLASE

Wu, N., Mo, Y., Gao, J., Pai, E.F.

(2000) Proc Natl Acad Sci U S A 97: 2017-2022

Released	2000-04-05
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	OROTIDINE 5'-PHOSPHATE DECARBOXYLASE (protein)

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1DVJ \| pdb_00001dvj	Download File View File

CRYSTAL STRUCTURE OF OROTIDINE MONOPHOSPHATE DECARBOXYLASE COMPLEXED WITH 6-AZAUMP

Wu, N., Mo, Y., Gao, J., Pai, E.F.

(2000) Proc Natl Acad Sci U S A 97: 2017-2022

Released	2000-04-05
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	OROTIDINE 5'-PHOSPHATE DECARBOXYLASE (protein)
Unique Ligands	UP6

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1EF4 \| pdb_00001ef4	Download File View File

SOLUTION STRUCTURE OF THE ESSENTIAL RNA POLYMERASE SUBUNIT RPB10 FROM METHANOBACTERIUM THERMOAUTOTROPHICUM

Mackereth, C.D., Arrowsmith, C.H., Edwards, A.M., Mcintosh, L.P., Northeast Structural Genomics Consortium (NESG)

(2000) Proc Natl Acad Sci U S A 97: 6316-6321

Released	2000-06-14
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	DNA-DIRECTED RNA POLYMERASE (protein)
Unique Ligands	ZN

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1EIJ \| pdb_00001eij	Download File View File

NMR ENSEMBLE OF METHANOBACTERIUM THERMOAUTOTROPHICUM PROTEIN 1615

Christendat, D., Booth, V., Gernstein, M., Arrowsmith, C.H., Edwards, A.M., Northeast Structural Genomics Consortium (NESG)

(2000) Nat Struct Biol 7: 903-909

Released	2000-11-03
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	HYPOTHETICAL PROTEIN MTH1615 (protein)

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1EIK \| pdb_00001eik	Download File View File

Solution Structure of RNA Polymerase Subunit RPB5 from Methanobacterium Thermoautotrophicum

Yee, A., Booth, V., Dharamsi, A., Engel, A., Edwards, A.M., Arrowsmith, C.H., Northeast Structural Genomics Consortium (NESG)

(2000) Proc Natl Acad Sci U S A 97: 6311-6315

Released	2000-06-21
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	RNA POLYMERASE SUBUNIT RPB5 (protein)

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1EIW \| pdb_00001eiw	Download File View File

Solution structure of hypothetical protein MTH538 from Methanobacterium thermoautotrophicum

Cort, J.R., Arrowsmith, C.H., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)

(2000) J Mol Biology 302: 189-203

Released	2000-09-06
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	HYPOTHETICAL PROTEIN MTH538 (protein)

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1EJ2 \| pdb_00001ej2	Download File View File

Crystal structure of methanobacterium thermoautotrophicum nicotinamide mononucleotide adenylyltransferase with bound NAD+

Saridakis, V., Christendat, D., Kimber, M.S., Edwards, A.M., Pai, E.F., Midwest Center for Structural Genomics (MCSG), Northeast Structural Genomics Consortium (NESG)

(2001) J Biological Chem 276: 7225-7232

Released	2001-03-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE (protein)
Unique Ligands	NA, NAD, SO4

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1EJE \| pdb_00001eje	Download File View File

CRYSTAL STRUCTURE OF AN FMN-BINDING PROTEIN

Christendat, D., Saridakis, V., Bochkarev, A., Arrowsmith, C., Edwards, A.M., Northeast Structural Genomics Consortium (NESG)

(2000) Nat Struct Biol 7: 903-909

Released	2000-10-11
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	FMN-BINDING PROTEIN (protein)
Unique Ligands	FMN, NI, SO4

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1EO1 \| pdb_00001eo1	Download File View File

Solution structure of hypothetical protein MTH1175 from Methanobacterium thermoautotrophicum

Cort, J.R., Arrowsmith, C.H., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)

(2000) J Struct Funct Genomics 1: 15-25

Released	2000-12-20
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	HYPOTHETICAL PROTEIN MTH1175 (protein)

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1EP0 \| pdb_00001ep0	Download File View File

HIGH RESOLUTION CRYSTAL STRUCTURE OF DTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASE FROM METHANOBACTERIUM THERMOAUTOTROPHICUM

Christendat, D., Saridakis, V., Bochkarev, A., Pai, E.F., Arrowsmith, C.H., Edwards, A.M., Northeast Structural Genomics Consortium (NESG)

(2000) J Biological Chem 275: 24608-24612

Released	2000-12-13
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	DTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASE (protein)

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1EPZ \| pdb_00001epz	Download File View File

CRYSTAL STRUCTURE OF DTDP-6-DEOXY-D-XYLO-4-HEXULOASE 3,5-EPIMERASE FROM METHANOBACTERIUM THERMOAUTOTROPHICUM WITH BOUND LIGAND.

Christendat, D., Saridakis, V., Bochkarev, A., Pai, E.F., Arrowsmith, C., Edwards, A.M.

(2000) J Biological Chem 275: 24608-24612

Released	2000-12-13
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	DTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASE (protein)
Unique Ligands	TYD

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1F07 \| pdb_00001f07	Download File View File

STRUCTURE OF COENZYME F420 DEPENDENT TETRAHYDROMETHANOPTERIN REDUCTASE FROM METHANOBACTERIUM THERMOAUTOTROPHICUM

Shima, S., Warkentin, E., Grabarse, W., Thauer, R.K., Ermler, U.

(2000) J Mol Biology 300: 935-950

Released	2000-09-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	COENZYME F420-DEPENDENT N5,N10-METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE (protein)
Unique Ligands	CL, MPD, MPO

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1F38 \| pdb_00001f38	Download File View File

X-RAY CRYSTALLOGRAPHIC STRUCTURE OF PRECORRIN 8W DECARBOXYLASE, THE PRODUCT OF GENE MT0146 IN THE METHANOBACTERIUM THERMOAUTOTROPHICUM GENOME

Keller, J.P., Smith, P.M., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

(2002) Structure 10: 1475-1487

Released	2003-06-10
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	PRECORRIN-8W DECARBOXYLASE (protein)

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1FXK \| pdb_00001fxk	Download File View File

CRYSTAL STRUCTURE OF ARCHAEAL PREFOLDIN (GIMC).

Siegert, R., Scheufler, C., Moarefi, I.

(2000) Cell 103: 621-632

Released	2000-12-06
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	PREFOLDIN (protein) PROTEIN (PREFOLDIN) (protein)

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1G5C \| pdb_00001g5c	Download File View File

CRYSTAL STRUCTURE OF THE 'CAB' TYPE BETA CLASS CARBONIC ANHYDRASE FROM METHANOBACTERIUM THERMOAUTOTROPHICUM

Strop, P., Smith, K.S., Iverson, T.M., Ferry, J.G., Rees, D.C.

(2001) J Biological Chem 276: 10299-10305

Released	2001-04-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	BETA-CARBONIC ANHYDRASE (protein)
Unique Ligands	CA, EPE, ZN

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1G7R \| pdb_00001g7r	Download File View File

X-RAY STRUCTURE OF TRANSLATION INITIATION FACTOR IF2/EIF5B

Roll-Mecak, A., Cao, C., Dever, T.E., Burley, S.K.

(2000) Cell 103: 781-792

Released	2000-12-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	TRANSLATION INITIATION FACTOR IF2/EIF5B (protein)

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1G7S \| pdb_00001g7s	Download File View File

X-RAY STRUCTURE OF TRANSLATION INITIATION FACTOR IF2/EIF5B COMPLEXED WITH GDP

Roll-Mecak, A., Cao, C., Dever, T.E., Burley, S.K.

(2000) Cell 103: 781-792

Released	2000-12-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	TRANSLATION INITIATION FACTOR IF2/EIF5B (protein)
Unique Ligands	GDP

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1G7T \| pdb_00001g7t	Download File View File

X-RAY STRUCTURE OF TRANSLATION INITIATION FACTOR IF2/EIF5B COMPLEXED WITH GDPNP

Roll-Mecak, A., Cao, C., Dever, T.E., Burley, S.K.

(2000) Cell 103: 781-792

Released	2000-12-01
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	TRANSLATION INITIATION FACTOR IF2/EIF5B (protein)
Unique Ligands	GNP, MG

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1GH8 \| pdb_00001gh8	Download File View File

SOLUTION STRUCTURE OF THE ARCHAEAL TRANSLATION ELONGATION FACTOR 1BETA FROM METHANOBACTERIUM THERMOAUTOTROPHICUM

Kozlov, G., Ekiel, I., Gehring, K., Northeast Structural Genomics Consortium (NESG)

(2000) J Biomol NMR 17: 187-194

Released	2000-12-13
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	TRANSLATION ELONGATION FACTOR 1BETA (protein)

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1GH9 \| pdb_00001gh9	Download File View File

SOLUTION STRUCTURE OF A 8.3 KDA PROTEIN (GENE MTH1184) FROM METHANOBACTERIUM THERMOAUTOTROPHICUM

Kozlov, G., Ekiel, I., Gehring, K., Northeast Structural Genomics Consortium (NESG)

(2000) Nat Struct Biol 7: 903-909

Released	2000-12-11
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	8.3 KDA PROTEIN (GENE MTH1184) (protein)

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1GTD \| pdb_00001gtd	Download File View File

NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG ID TT50) STRUCTURE OF MTH169, THE PURS SUBUNIT OF FGAM SYNTHETASE

Batra, R., Christendat, D., Saxild, H.H., Arrowsmith, C., Tong, L.

(2002) Proteins 49: 285

Released	2002-12-12
Method	X-RAY DIFFRACTION 2.56 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	MTH169 (protein)

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1HBM \| pdb_00001hbm	Download File View File

METHYL-COENZYME M REDUCTASE ENZYME PRODUCT COMPLEX

Ermler, U., Grabarse, W.

(2001) J Mol Biology 309: 315

Released	2001-08-16
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	METHYL-COENZYME M REDUCTASE I ALPHA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I BETA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I GAMMA SUBUNIT (protein)
Unique Ligands	CL, F43, GOL, MG, NA, SHT, ZN

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1HBN \| pdb_00001hbn	Download File View File

METHYL-COENZYME M REDUCTASE

Ermler, U., Grabarse, W.

(2001) J Mol Biology 309: 315

Released	2001-08-16
Method	X-RAY DIFFRACTION 1.16 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	METHYL-COENZYME M REDUCTASE I ALPHA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I BETA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I GAMMA SUBUNIT (protein)
Unique Ligands	CL, COM, F43, GOL, MG, NA, TP7, ZN

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1HBO \| pdb_00001hbo	Download File View File

METHYL-COENZYME M REDUCTASE MCR-RED1-SILENT

Grabarse, W.

(2001) J Mol Biology 309: 315

Released	2001-08-16
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	METHYL-COENZYME M REDUCTASE I ALPHA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I BETA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I GAMMA SUBUNIT (protein)
Unique Ligands	CL, COM, F43, GOL, MG, NA, TP7, ZN

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1HBU \| pdb_00001hbu	Download File View File

METHYL-COENZYME M REDUCTASE IN THE MCR-RED1-SILENT STATE IN COMPLEX with COENZYME M

Ermler, U., Grabarse, W.

(2001) J Mol Biology 309: 315

Released	2001-08-16
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Methanothermobacter marburgensis str. Marburg
Macromolecule	METHYL-COENZYME M REDUCTASE I ALPHA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I BETA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I GAMMA SUBUNIT (protein)
Unique Ligands	CL, COM, F43, GOL, MG, NA, TP7, ZN

1 to 25 of 358 Structures

Page 1 of 15

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1DV7 | pdb_00001dv7

1DVJ | pdb_00001dvj

1EF4 | pdb_00001ef4

1EIJ | pdb_00001eij

1EIK | pdb_00001eik

1EIW | pdb_00001eiw

1EJ2 | pdb_00001ej2

1EJE | pdb_00001eje

1EO1 | pdb_00001eo1

1EP0 | pdb_00001ep0

1EPZ | pdb_00001epz

1F07 | pdb_00001f07

1F38 | pdb_00001f38

1FXK | pdb_00001fxk

1G5C | pdb_00001g5c

1G7R | pdb_00001g7r

1G7S | pdb_00001g7s

1G7T | pdb_00001g7t

1GH8 | pdb_00001gh8

1GH9 | pdb_00001gh9

1GTD | pdb_00001gtd

1HBM | pdb_00001hbm

1HBN | pdb_00001hbn

1HBO | pdb_00001hbo

1HBU | pdb_00001hbu