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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Sellers, B.D."

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Search Summary

This query matches 24 Structures.

Refinements

Structure Determination Methodology

experimental (24)

Scientific Name of Source Organism

	Homo sapiens (12)
	Escherichia coli (8)
	synthetic construct (4)
	Bos taurus (2)
	Escherichia coli CFT073 (2)

Taxonomy

	Eukaryota (14)
	Bacteria (10)
	other sequences (4)

Experimental Method

	X-RAY DIFFRACTION (19)
	ELECTRON MICROSCOPY (5)

Polymer Entity Type

Protein (24)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.0 - 2.5 (7)
	2.5 - 3.0 (7)
	3.0 - 3.5 (3)
	3.5 - 4.0 (1)
	4.0 - 4.5 (1)
	> 4.5 (2)

Release Date

	2010 - 2014 (2)
	2015 - 2019 (13)
	2020 - 2024 (8)
	2025 - 2029 (1)

Enzyme Classification Name

	Translocases (3)
	Hydrolases (2)
	Oxidoreductases (1)

Membrane Protein Annotation

	PDBTM (10)
	MemProtMD (7)
	OPM (4)
	mpstruc (3)

Symmetry Type

	Asymmetric (18)
	Cyclic (5)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (13)
	Membrane and cell surface proteins and peptides (2)
	Artifacts (1)

AllSelected

1 to 24 of 24 Structures

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3LVG \| pdb_00003lvg	Download File View File

Crystal structure of a clathrin heavy chain and clathrin light chain complex

Wilbur, J.D., Hwang, P.K., Ybe, J.A., Lane, M., Sellers, B.D., Jacobson, M.P., Fletterick, R.J., Brodsky, F.M.

(2010) Dev Cell 18: 841-848

Released	2010-06-09
Method	X-RAY DIFFRACTION 7.94 Å
Organisms	Bos taurus
Macromolecule	Clathrin heavy chain 1 (protein) Clathrin light chain B (protein)

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3LVH \| pdb_00003lvh	Download File View File

Crystal structure of a clathrin heavy chain and clathrin light chain complex

Wilbur, J.D., Hwang, P.K., Ybe, J.A., Lane, M., Sellers, B.D., Jacobson, M.P., Fletterick, R.J., Brodsky, F.M.

(2010) Dev Cell 18: 841-848

Released	2010-06-09
Method	X-RAY DIFFRACTION 9 Å
Organisms	Bos taurus
Macromolecule	Clathrin heavy chain 1 (protein) Clathrin light chain B (protein)

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5H8F \| pdb_00005h8f	Download File View File

Structure of the apo human GluN1/GluN2A LBD

Wallweber, H.J.A., Lupardus, P.J.

(2016) Neuron 89: 983-999

Released	2016-02-24
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor ionotropic, NMDA 1 (protein) Glutamate receptor ionotropic, NMDA 2A (protein)
Unique Ligands	GLU, GLY, GOL

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5H8H \| pdb_00005h8h	Download File View File

Structure of the human GluN1/GluN2A LBD in complex with GNE3419

Wallweber, H.J.A., Lupardus, P.J.

(2016) Neuron 89: 983-999

Released	2016-02-24
Method	X-RAY DIFFRACTION 2.23 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor ionotropic, NMDA 1,Glutamate receptor ionotropic, NMDA 1 (protein) Glutamate receptor ionotropic, NMDA 2A,Glutamate receptor ionotropic, NMDA 2A (protein)
Unique Ligands	5YC, ACT, CA, GLU, GLY

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5H8N \| pdb_00005h8n	Download File View File

Structure of the human GluN1/GluN2A LBD in complex with NAM

Wallweber, H.J.A., Lupardus, P.J.

(2016) Neuron 89: 983-999

Released	2016-02-24
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor ionotropic, NMDA 1,Glutamate receptor ionotropic, NMDA 1 (protein) Glutamate receptor ionotropic, NMDA 2A,Glutamate receptor ionotropic, NMDA 2A (protein)
Unique Ligands	5YD, CA, GLU, GLY

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5H8Q \| pdb_00005h8q	Download File View File

Structure of the human GluN1/GluN2A LBD in complex with GNE8324

Wallweber, H.J.A., Lupardus, P.J.

(2016) Neuron 89: 983-999

Released	2016-02-24
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor ionotropic, NMDA 1,Glutamate receptor ionotropic, NMDA 1 (protein) Glutamate receptor ionotropic, NMDA 2A,Glutamate receptor ionotropic, NMDA 2A (protein)
Unique Ligands	5YE, ACT, GLU, GLY

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5H8S \| pdb_00005h8s	Download File View File

Structure of the human GluA2 LBD in complex with GNE3419

Wallweber, H.J.A., Lupardus, P.J.

(2016) Neuron 89: 983-999

Released	2016-02-24
Method	X-RAY DIFFRACTION 1.703 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor 2,Glutamate receptor 2 (protein)
Unique Ligands	5YC, CAC, GLU, ZN

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5I2K \| pdb_00005i2k	Download File View File

Structure of the human GluN1/GluN2A LBD in complex with 7-{[ethyl(4-fluorophenyl)amino]methyl}-N,2-dimethyl-5-oxo-5H-[1,3]thiazolo[3,2-a]pyrimidine-3-carboxamide (compound 19)

Wallweber, H.J.A., Lupardus, P.J.

(2016) J Med Chem 59: 2760-2779

Released	2016-03-16
Method	X-RAY DIFFRACTION 2.86 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor ionotropic, NMDA 1 (protein) Glutamate receptor ionotropic, NMDA 2A (protein)
Unique Ligands	67H, GLU, GLY

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5I2N \| pdb_00005i2n	Download File View File

Structure of the human GluN1/GluN2A LBD in complex with N-ethyl-7-{[2-fluoro-3-(trifluoromethyl)phenyl]methyl}-2-methyl-5-oxo-5H-[1,3]thiazolo[3,2-a]pyrimidine-3-carboxamide (compound 29)

Wallweber, H.J.A., Lupardus, P.J.

(2016) J Med Chem 59: 2760-2779

Released	2016-03-16
Method	X-RAY DIFFRACTION 2.12 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor ionotropic, NMDA 1 (protein) Glutamate receptor ionotropic, NMDA 2A (protein)
Unique Ligands	67J, CA, EPE, GLU, GLY

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5KCJ \| pdb_00005kcj	Download File View File

Structure of the human GluN1/GluN2A LBD in complex with GNE6901

Wallweber, H.J.A., Lupardus, P.J.

(2016) Neuron 89: 983-999

Released	2016-07-13
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor ionotropic, NMDA 1 (protein) Glutamate receptor ionotropic, NMDA 2A (protein)
Unique Ligands	6RM, ACT, GLU, GLY

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5KDT \| pdb_00005kdt	Download File View File

Structure of the human GluN1/GluN2A LBD in complex with GNE0723

Wallweber, H.J.A., Lupardus, P.J.

(2016) J Med Chem 59: 2760-2779

Released	2016-07-13
Method	X-RAY DIFFRACTION 2.44 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor ionotropic, NMDA 1 (protein) Glutamate receptor ionotropic, NMDA 2A (protein)
Unique Ligands	6RV, ACT, GLU, GLY

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5TP9 \| pdb_00005tp9	Download File View File

Structure of the human GluN1/GluN2A LBD in complex with compound 2 (GNE9178)

Wallweber, H.J.A., Lupardus, P.J.

(2017) ACS Med Chem Lett 8: 84-89

Released	2016-11-30
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor ionotropic, NMDA 1 (protein) Glutamate receptor ionotropic, NMDA 2A (protein)
Unique Ligands	7H0, ACT, CA, GLU, GLY

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5TPA \| pdb_00005tpa	Download File View File

Structure of the human GluN1/GluN2A LBD in complex with compound 9 (GNE3500)

Wallweber, H.J.A., Lupardus, P.J.

(2017) ACS Med Chem Lett 8: 84-89

Released	2016-11-30
Method	X-RAY DIFFRACTION 2.48 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor ionotropic, NMDA 1 (protein) Glutamate receptor ionotropic, NMDA 2A (protein)
Unique Ligands	7H2, GLU, GLY

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6BPL \| pdb_00006bpl	Download File View File

E. coli MsbA in complex with LPS and inhibitor G907

Ho, H., Koth, C.M., Payandeh, J.

(2018) Nature 557: 196-201

Released	2018-05-02
Method	X-RAY DIFFRACTION 2.908 Å
Organisms	Escherichia coli CFT073
Macromolecule	Lipid A export ATP-binding/permease protein MsbA (protein)
Unique Ligands	3PE, AU7, DAO, DPO, FTT, MYR, PA1, PO4
Unique branched monosaccharides	GCS, GLC, GMH, KDO

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6BPP \| pdb_00006bpp	Download File View File

E. coli MsbA in complex with LPS and inhibitor G092

Ho, H., Koth, C.M., Payandeh, J.

(2018) Nature 557: 196-201

Released	2018-05-02
Method	X-RAY DIFFRACTION 2.92 Å
Organisms	Escherichia coli CFT073
Macromolecule	Lipid A export ATP-binding/permease protein MsbA (protein)
Unique Ligands	3PE, DAO, E1M, FTT, MYR, PO4
Unique branched monosaccharides	GCS, GLC, GMH, KDO, PA1

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6VBN \| pdb_00006vbn	Download File View File

Crystal Structure of hTDO2 bound to inhibitor GNE1

Harris, S.F., Oh, A.

(2020) ACS Med Chem Lett 11: 541-549

Released	2020-05-06
Method	X-RAY DIFFRACTION 3.18 Å
Organisms	Homo sapiens
Macromolecule	Tryptophan 2,3-dioxygenase (protein)
Unique Ligands	HEM, QVY

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6XLP \| pdb_00006xlp	Download File View File

Structure of the essential inner membrane lipopolysaccharide-PbgA complex

Payandeh, J., Clairefeuille, T.

(2020) Nature 584: 479-483

Released	2020-08-26
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	LPS binding protein (protein)
Unique Ligands	3PE, OLB, PG4, SO4
Unique branched monosaccharides	KDO, VJ1, VJ4

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7SEL \| pdb_00007sel	Download File View File

E. coli MsbA in complex with LPS and inhibitor G7090 (compound 3)

Payandeh, J., Koth, C.M., Verma, V.A.

(2022) J Med Chem 65: 4085-4120

Released	2022-03-09
Method	X-RAY DIFFRACTION 2.978 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent lipid A-core flippase (protein)
Unique Ligands	95X, KDL

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9CNW \| pdb_00009cnw	Download File View File

CryoEM structure of the APO-BAM complex in DDM detergent

Sun, D., Tegunov, D., Payandeh, J.

(2024) Nat Commun 15: 8718-8718

Released	2024-12-25
Method	ELECTRON MICROSCOPY 2.6 Å
Organisms	Escherichia coli
Macromolecule	Outer membrane protein assembly factor BamA (protein) Outer membrane protein assembly factor BamB (protein) Outer membrane protein assembly factor BamC (protein) Outer membrane protein assembly factor BamD (protein) Outer membrane protein assembly factor BamE (protein)

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9CNX \| pdb_00009cnx	Download File View File

CryoEM structure of BAM in complex with the PTB1 closed-state inhibitor (in DDM detergent)

Sun, D., Tegunov, D., Payandeh, J.

(2024) Nat Commun 15: 8718-8718

Released	2024-12-25
Method	ELECTRON MICROSCOPY 3.55 Å
Organisms	Escherichia coli synthetic construct
Macromolecule	Unique protein chains: 6
Unique Ligands	ZN

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9CNY \| pdb_00009cny	Download File View File

CryoEM structure of the APO-BAM complex in SMA nanodisc

Sun, D., Tegunov, D., Payandeh, J.

(2024) Nat Commun 15: 8718-8718

Released	2024-12-25
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Escherichia coli
Macromolecule	Outer membrane protein assembly factor BamA (protein) Outer membrane protein assembly factor BamB (protein) Outer membrane protein assembly factor BamC (protein) Outer membrane protein assembly factor BamD (protein) Outer membrane protein assembly factor BamE (protein)

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9CNZ \| pdb_00009cnz	Download File View File

Structure of BAM complexed with PTB2 ligand in detergent

Sun, D., Tegunov, D., Payandeh, J.

(2024) Nat Commun 15: 8718-8718

Released	2024-12-25
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Escherichia coli synthetic construct
Macromolecule	Unique protein chains: 6

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9CO0 \| pdb_00009co0	Download File View File

CryoEM structure of BAM in complex with the PTB2 open-state inhibitor (in SMA nanodisc)

Sun, D., Tegunov, D., Payandeh, J.

(2024) Nat Commun 15: 8718-8718

Released	2024-12-25
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Escherichia coli synthetic construct
Macromolecule	Unique protein chains: 6

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9CO2 \| pdb_00009co2	Download File View File

Crystal structure of BamA in complex with the PTB2 open-state inhibitor (anisotropic data set)

Sun, D., Payandeh, J.

(2024) Nat Commun 15: 8718-8718

Released	2025-01-15
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Escherichia coli synthetic construct
Macromolecule	Outer membrane protein assembly factor BamA (protein) PTB2 circular peptide (protein)

1 to 24 of 24 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

3LVG | pdb_00003lvg

3LVH | pdb_00003lvh

5H8F | pdb_00005h8f

5H8H | pdb_00005h8h

5H8N | pdb_00005h8n

5H8Q | pdb_00005h8q

5H8S | pdb_00005h8s

5I2K | pdb_00005i2k

5I2N | pdb_00005i2n

5KCJ | pdb_00005kcj

5KDT | pdb_00005kdt

5TP9 | pdb_00005tp9

5TPA | pdb_00005tpa

6BPL | pdb_00006bpl

6BPP | pdb_00006bpp

6VBN | pdb_00006vbn

6XLP | pdb_00006xlp

7SEL | pdb_00007sel

9CNW | pdb_00009cnw

9CNX | pdb_00009cnx

9CNY | pdb_00009cny

9CNZ | pdb_00009cnz

9CO0 | pdb_00009co0

9CO2 | pdb_00009co2