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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Papp-Wallace, K.M."

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Search Summary

This query matches 64 Structures.

Refinements

Structure Determination Methodology

experimental (64)

Scientific Name of Source Organism

	Klebsiella pneumoniae (24)
	Pseudomonas aeruginosa (13)
	Escherichia coli (6)
	Klebsiella pneumoniae IS53 (6)
	Burkholderia multivorans ATCC 17616 (3)
	Pseudomonas aeruginosa PAO1 (3)
	Acinetobacter baumannii (2)
	Burkholderia pseudomallei K96243 (2)
	Citrobacter freundii (2)
	Salmonella enterica (2)

More...

Taxonomy

	Bacteria (64)
	other sequences (1)

Experimental Method

X-RAY DIFFRACTION (64)

Polymer Entity Type

Protein (64)

Refinement Resolution (Å)

	0.5 - 1.0 (6)
	1.0 - 1.5 (25)
	1.5 - 2.0 (22)
	2.0 - 2.5 (8)
	2.5 - 3.0 (2)
	3.0 - 3.5 (1)

Release Date

	2010 - 2014 (6)
	2015 - 2019 (21)
	2020 - 2024 (34)
	2025 - 2029 (3)

Enzyme Classification Name

Hydrolases (62)

Symmetry Type

	Asymmetric (63)
	Cyclic (1)

SCOP Classification

	Multi-domain proteins (alpha and beta) (39)
	Alpha and beta proteins (a+b) (6)
	Artifacts (2)

AllSelected

1 to 25 of 64 Structures

Page 1 of 3

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3RXW \| pdb_00003rxw	Download File View File

KPC-2 carbapenemase in complex with PSR3-226

Ke, W., van den Akker, F.

(2012) Antimicrob Agents Chemother 56: 2713-2718

Released	2012-03-21
Method	X-RAY DIFFRACTION 1.26 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Carbepenem-hydrolyzing beta-lactamase KPC (protein)
Unique Ligands	CIT, SR3

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3RXX \| pdb_00003rxx	Download File View File

KPC-2 carbapenemase in complex with 3-NPBA

Ke, W., van den Akker, F.

(2012) Antimicrob Agents Chemother 56: 2713-2718

Released	2012-03-21
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Carbepenem-hydrolyzing beta-lactamase KPC (protein)
Unique Ligands	NPB

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3W4O \| pdb_00003w4o	Download File View File

Crystal structure of PenI beta-lactamase from Burkholderia pseudomallei at pH9.5

Nukaga, M., Ohuchi, N., Papp-Wallace, K.M., Taracila, M.A., Bonomo, R.A.

(2013) J Biological Chem 288: 19090-19102

Released	2013-05-15
Method	X-RAY DIFFRACTION 1.18 Å
Organisms	Burkholderia pseudomallei K96243
Macromolecule	Beta-lactamase (protein)
Unique Ligands	GOL, NHE

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3W4P \| pdb_00003w4p	Download File View File

Crystal structure of PenI beta-lactamase from Burkholderia pseudomallei at pH7.5

Nukaga, M., Ohuchi, N., Papp-Wallace, K.M., Taracila, M.A., Bonomo, R.A.

(2013) J Biological Chem 288: 19090-19102

Released	2013-05-15
Method	X-RAY DIFFRACTION 1.05 Å
Organisms	Burkholderia pseudomallei K96243
Macromolecule	Beta-lactamase (protein)
Unique Ligands	GOL, SO4

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3W4Q \| pdb_00003w4q	Download File View File

Crystal structure of PenA beta-lactamase from Burkholderia multivorans at pH4.2

Nukaga, M., Ohuchi, N., Papp-Wallace, K.M., Taracila, M.A., Bonomo, R.A.

(2013) J Biological Chem 288: 19090-19102

Released	2013-05-15
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Burkholderia multivorans ATCC 17616
Macromolecule	Beta-lactamase (protein)

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4FCF \| pdb_00004fcf	Download File View File

K234R: apo structure of inhibitor resistant beta-lactamase

Rodkey, E.A., van den Akker, F.

(2013) J Med Chem 56: 1084-1097

Released	2012-12-26
Method	X-RAY DIFFRACTION 1.09 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase SHV-1 (protein)
Unique Ligands	MA4, TAU

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4ZAM \| pdb_00004zam	Download File View File

Crystal structure of SHV-1 beta-lactamase bound to avibactam

Krishnan, N., van den Akker, F.

(2015) PLoS One 10: e0136813-e0136813

Released	2016-01-27
Method	X-RAY DIFFRACTION 1.42 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase SHV-1 (protein)
Unique Ligands	MA4, NXL

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4ZBE \| pdb_00004zbe	Download File View File

Crystal structure of KPC-2 beta-lactamase complexed with avibactam

Nguyen, N.Q., van den Akker, F.

(2015) PLoS One 10: e0136813-e0136813

Released	2016-01-27
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Carbapenem-hydrolyzing beta-lactamase KPC (protein)
Unique Ligands	CIT, NXL

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5CGS \| pdb_00005cgs	Download File View File

CRYSTAL STRUCTURE OF Fox-4 cephamycinase

Malashkevich, V.N., Toro, R., Lefurgy, S., Almo, S.C.

(2015) Antimicrob Agents Chemother

Released	2016-02-03
Method	X-RAY DIFFRACTION 1.634 Å
Organisms	Escherichia coli
Macromolecule	Beta-lactamase (protein)
Unique Ligands	ZN

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5CGW \| pdb_00005cgw	Download File View File

CRYSTAL STRUCTURE OF Fox-4 cephamycinase mutant Y150F

Malashkevich, V.N., Toro, R., Lefurgy, S., Almo, S.C.

(2015) Antimicrob Agents Chemother

Released	2016-02-03
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Escherichia coli
Macromolecule	Beta-lactamase (protein)
Unique Ligands	ACT, ZN

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5CGX \| pdb_00005cgx	Download File View File

CRYSTAL STRUCTURE OF Fox-4 cephamycinase mutant Y150F complexed with cefoxitin

Malashkevich, V.N., Toro, R., Lefurgy, S., Almo, S.C.

(2015) Antimicrob Agents Chemother

Released	2016-02-03
Method	X-RAY DIFFRACTION 1.21 Å
Organisms	Escherichia coli
Macromolecule	Beta-lactamase (protein)
Unique Ligands	1S7, NA, ZN

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5CHJ \| pdb_00005chj	Download File View File

CRYSTAL STRUCTURE OF Fox-4 cephamycinase complexed with cephalothin BATSI (SM23)

Malashkevich, V.N., Toro, R., Lefurgy, S., Almo, S.C.

(2020) Biomolecules 10:

Released	2016-08-03
Method	X-RAY DIFFRACTION 1.358 Å
Organisms	Escherichia coli
Macromolecule	Beta-lactamase (protein)
Unique Ligands	ACT, SM2, ZN

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5CHM \| pdb_00005chm	Download File View File

CRYSTAL STRUCTURE OF Fox-4 cephamycinase complexed with ceftazidime BATSI (LP06)

Malashkevich, V.N., Toro, R., Lefurgy, S., Almo, S.C.

(2020) Biomolecules 10:

Released	2016-08-03
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli
Macromolecule	Beta-lactamase (protein)
Unique Ligands	ACT, CB4, NA, ZN

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5ZA2 \| pdb_00005za2	Download File View File

Fox-4 beta-lactamase complexed with avibactam

Nukaga, M., Hoshino, T., Papp-Wallace, K.M., Bonomo, R.A.

(2018) Antimicrob Agents Chemother 62:

Released	2018-03-07
Method	X-RAY DIFFRACTION 1.503 Å
Organisms	Escherichia coli
Macromolecule	Beta-lactamase (protein)
Unique Ligands	EPE, GOL, NXL

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6B1F \| pdb_00006b1f	Download File View File

Crystal structure KPC-2 beta-lactamase complexed with WCK 4234 by soaking

van den Akker, F., Nguyen, N.Q.

(2018) J Med Chem 61: 4067-4086

Released	2018-08-01
Method	X-RAY DIFFRACTION 1.44 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Carbapenem-hydrolyzing beta-lactamase KPC (protein)
Unique Ligands	C8Y, CIT, EDO

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6B1H \| pdb_00006b1h	Download File View File

Crystal structure KPC-2 beta-lactamase complexed with WCK 4234 by co-crystallization

van den Akker, F., Nhuyen, N.Q.

(2018) J Med Chem 61: 4067-4086

Released	2018-08-01
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Carbapenem-hydrolyzing beta-lactamase KPC (protein)
Unique Ligands	ACT, C8Y, CL, SO4

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6B1J \| pdb_00006b1j	Download File View File

Crystal structure KPC-2 beta-lactamase complexed with WCK 5107 by soaking

van den Akker, F., Nguyen, N.Q.

(2018) J Med Chem 61: 4067-4086

Released	2018-08-01
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Carbapenem-hydrolyzing beta-lactamase KPC (protein)
Unique Ligands	C8V, CIT, EDO

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6B1W \| pdb_00006b1w	Download File View File

Crystal structure KPC-2 beta-lactamase complexed with WCK 5107 by co-crystallization

van den Akker, F., Nguyen, N.Q.

(2018) J Med Chem 61: 4067-4086

Released	2018-08-01
Method	X-RAY DIFFRACTION 1.73 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Carbapenem-hydrolyzing beta-lactamase KPC (protein)
Unique Ligands	C8V, CL, SO4

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6B1X \| pdb_00006b1x	Download File View File

Crystal structure KPC-2 beta-lactamase complexed with WCK 5153 by soaking

van den Akker, F., Nguyen, N.Q.

(2018) J Med Chem 61: 4067-4086

Released	2018-08-01
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Carbapenem-hydrolyzing beta-lactamase KPC (protein)
Unique Ligands	C9D, CIT, EDO

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6B1Y \| pdb_00006b1y	Download File View File

Crystal structure KPC-2 beta-lactamase complexed with WCK 5153 by co-crystallization

van den Akker, F., Nguyen, N.Q.

(2018) J Med Chem 61: 4067-4086

Released	2018-08-01
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Carbapenem-hydrolyzing beta-lactamase KPC (protein)
Unique Ligands	CD7, CL, SO4