5IY5 | pdb_00005iy5


CDL: CARDIOLIPIN

CDL is a Ligand Of Interest in 5IY5 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5IY5_CDL_C_306Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5IY5_CDL_C_306Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5IY5_CDL_C_306Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5IY5_CDL_C_306 20% 30% 0.226 0.831.38 1.41 12 10210100%1
5IY5_CDL_P_306 11% 34% 0.273 0.7921.41 1.22 12 10190100%1
5IY5_CDL_T_101 8% 28% 0.252 0.7311.43 1.48 12 15320100%1
5IY5_CDL_G_101 4% 30% 0.301 0.6611.44 1.35 12 13290100%1
6JY3_CDL_B_301 33% 24% 0.163 0.9081.53 1.57 5 140064%1
6JUW_CDL_C_307 31% 25% 0.195 0.8621.4 1.66 14 17190100%1
6JY4_CDL_B_301 29% 25% 0.183 0.9041.42 1.6 4 132064%1
7D5X_CDL_C_308 27% 29% 0.184 0.861.27 1.57 10 1213085%1
7CP5_CDL_P_304 24% 42% 0.181 0.8781.22 1.05 7 44061%1
9GCX_CDL_C_504 62% 68% 0.143 0.9340.43 0.79 - 2160100%1
5Y5S_CDL_M_415 41% 34% 0.128 0.9531.32 1.27 3 31039%1
5NMI_CDL_C_506 38% 30% 0.117 0.9311.36 1.45 4 40037%1
2GNU_CDL_M_1309 38% 22% 0.122 0.9841.77 1.5 3 30010%1
3ZDQ_CDL_A_1721 37% 64% 0.215 0.9430.72 0.65 4 428184%0.5