5B3S | pdb_00005b3s


PEK: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE

PEK is a Ligand Of Interest in 5B3S designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5B3S_PEK_C_302Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5B3S_PEK_C_302Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5B3S_PEK_C_302 81% 47% 0.118 0.970.85 1.18 2 390100%1
5B3S_PEK_P_303 62% 46% 0.124 0.9420.77 1.3 1 50085%1
5B3S_PEK_P_302 10% 34% 0.236 0.7621.18 1.44 2 56091%1
5B3S_PEK_C_303 9% 35% 0.283 0.7681.12 1.44 2 560100%1
5B3S_PEK_P_304 5% 35% 0.291 0.6941.07 1.49 2 860100%1
5B3S_PEK_T_102 5% 31% 0.295 0.7281.18 1.56 2 54083%1
7YPY_PEK_C_307 85% 53% 0.095 0.9630.76 1.05 1 39098%1
7VVR_PEK_P_303 82% 52% 0.106 0.9610.69 1.14 2 550100%1
7VUW_PEK_C_303 82% 50% 0.109 0.9640.67 1.23 1 550100%1
7D5X_PEK_C_304 81% 49% 0.12 0.9710.85 1.13 2 2120100%1
5B1B_PEK_P_308 80% 41% 0.109 0.9590.73 1.53 2 790100%1