3SJD | pdb_00003sjd


ADP: ADENOSINE-5'-DIPHOSPHATE

ADP is a Ligand Of Interest in 3SJD designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3SJD_ADP_B_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3SJD_ADP_B_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3SJD_ADP_B_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3SJD_ADP_B_401 4% 32% 0.449 0.8221.04 1.63 1 680100%1
3SJD_ADP_A_401 4% 28% 0.371 0.7361.38 1.51 2 5110100%1
3SJD_ADP_C_401 1% 28% 0.484 0.7041.37 1.5 5 6100100%1
4XWO_ADP_G_403 94% 2% 0.064 0.9624.3 2.63 8 400100%0.45
3ZS9_ADP_B_401 85% 37% 0.119 0.9851.09 1.37 1 400100%1
2WOJ_ADP_C_401 77% 29% 0.15 0.991.36 1.5 4 600100%1
4XTR_ADP_A_401 74% 1% 0.138 0.9684.71 2.65 10 500100%0.37
3A37_ADP_A_400 55% 18% 0.18 0.9481.83 1.68 3 400100%1
3KB1_ADP_A_301 100% 22% 0.021 0.9962.06 1.21 6 410100%1
3TW6_ADP_B_2000 100% 44% 0.019 0.9970.83 1.34 - 430100%1
5GZA_ADP_A_401 100% 2% 0.019 0.9973.36 3.39 13 1110100%1
5KHW_ADP_A_1201 100% 41% 0.023 0.9951.1 1.2 1 200100%1
8VZA_ADP_A_603 100% 37% 0.024 0.9950.96 1.51 1 500100%1