3OMN | pdb_00003omn


TRD: TRIDECANE

TRD is a Ligand Of Interest in 3OMN designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3OMN_TRD_A_3Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3OMN_TRD_A_3Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3OMN_TRD_A_3Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3OMN_TRD_A_3 22% 82% 0.217 0.8360.28 0.51 - -10100%1
3OMN_TRD_A_1009 22% 89% 0.186 0.8870.26 0.39 - -0054%1
3OMN_TRD_D_3 20% 80% 0.253 0.8530.18 0.66 - -00100%1
3OMN_TRD_D_14 16% 90% 0.222 0.8720.25 0.37 - -0054%1
3OMN_TRD_B_4 15% 88% 0.196 0.8270.25 0.41 - -0062%1
3OMN_TRD_A_553 14% 84% 0.263 0.8130.23 0.52 - -10100%1
3OMN_TRD_C_552 10% 82% 0.312 0.8160.23 0.56 - -10100%1
3OMN_TRD_A_552 4% 88% 0.285 0.7690.33 0.33 - -0046%1
3OMN_TRD_A_1013 3% 86% 0.312 0.7220.25 0.47 - -0054%1
3DTU_TRD_D_7 47% 81% 0.148 0.8850.24 0.58 - -20100%1
6PW0_TRD_D_303 43% 75% 0.148 0.9270.12 0.85 - -0069%1
6PW1_TRD_D_301 42% 76% 0.141 0.9130.12 0.81 - -0069%1
2GSM_TRD_A_5007 41% 85% 0.15 0.8620.22 0.51 - -20100%1
3OMA_TRD_D_3 32% 82% 0.206 0.8820.2 0.59 - -10100%1
6GA3_TRD_A_303 59% 75% 0.109 0.8910.12 0.84 - -00100%1
4ZR1_TRD_A_410 49% 75% 0.18 0.9260.12 0.84 - -30100%1
6LPK_TRD_A_2422 41% 98% 0.14 0.8530.14 0.14 - -00100%1