Ligand validation:3D04

BEN: BENZAMIDINE

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3D04_BEN_A_161	79%	51%	0.1	0.944	1.3	0.63	1	-	1	0	100%	1
3D04_BEN_C_161	18%	41%	0.283	0.87	1.24	1.05	1	1	0	0	100%	1
3D04_BEN_E_162	17%	39%	0.236	0.813	1.26	1.14	1	1	0	0	100%	1
3D04_BEN_A_162	17%	44%	0.249	0.825	1.38	0.81	1	-	0	0	100%	1
3D04_BEN_F_161	12%	44%	0.276	0.811	1.3	0.89	1	1	0	0	100%	1
3D04_BEN_E_161	7%	45%	0.278	0.728	1.17	0.96	1	1	0	0	100%	1
3CF8_BEN_A_161	83%	39%	0.099	0.959	1.25	1.15	1	1	0	0	100%	1
3CF9_BEN_E_161	74%	48%	0.126	0.957	1.3	0.72	1	-	0	0	100%	1
2GLM_BEN_A_2002	74%	47%	0.127	0.958	1.48	0.6	1	-	2	0	100%	1
3DP0_BEN_E_161	67%	45%	0.136	0.944	1.54	0.61	1	-	0	0	100%	1
3B7J_BEN_A_161	65%	45%	0.124	0.925	1.54	0.6	1	-	2	0	100%	1
4I8K_BEN_A_252	100%	29%	0.033	0.993	0.81	1.99	-	4	1	0	100%	0.61
4I8G_BEN_A_302	100%	40%	0.039	0.989	0.83	1.48	-	2	1	0	100%	0.49
2BLW_BEN_A_1247	100%	23%	0.034	0.982	1.14	2.03	1	2	0	0	100%	1
4I8J_BEN_A_302	100%	47%	0.04	0.987	0.69	1.33	-	-	1	0	100%	0.57
2BLV_BEN_A_1247	100%	24%	0.036	0.982	1.12	1.97	1	2	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.