PD2: PYRIDINE-2,4-DICARBOXYLIC ACID

PD2 is a Ligand Of Interest in 2JIG designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2JIG_PD2_A_1254Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2JIG_PD2_A_1254Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2JIG_PD2_A_1254 89% 38% 0.086 0.9651.32 1.1 2 220100%1
6I9L_PD2_A_502 96% 25% 0.072 0.9831.57 1.46 3 200100%1
4NHK_PD2_A_702 92% 42% 0.082 0.9711.1 1.15 - 100100%1
5JTC_PD2_A_802 89% 27% 0.099 0.981.35 1.56 1 500100%1
5A3W_PD2_A_1757 86% 17% 0.092 0.9611.69 1.94 4 500100%1
2VD7_PD2_B_1356 77% 16% 0.103 0.9421.28 2.36 2 700100%1