GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 1RPN designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1RPN_GDP_C_1603 | 87% | 40% | 0.105 | 0.978 | 1.03 | 1.32 | 2 | 4 | 0 | 0 | 100% | 1 |
| 1RPN_GDP_D_1604 | 87% | 40% | 0.103 | 0.975 | 1.06 | 1.28 | 2 | 4 | 0 | 0 | 100% | 1 |
| 1RPN_GDP_B_1602 | 85% | 41% | 0.104 | 0.971 | 1.02 | 1.28 | 2 | 4 | 0 | 0 | 100% | 1 |
| 1RPN_GDP_A_1601 | 46% | 43% | 0.216 | 0.951 | 1 | 1.2 | 2 | 2 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 8YL3_GDP_A_201 | 100% | 57% | 0.035 | 0.99 | 0.89 | 0.75 | 2 | - | 0 | 0 | 100% | 1 |
