SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 50 mM potassium phosphate, 100 mM sodium chloride, 4 mM DTT, pH7 | 90% H2O with 10% D2O | 50 ~ 100 mM | 7 | ambient | 298 | |
2 | 3D_15N-separated_NOESY | |||||||
3 | 3D HNCACB, 3DHNCO, 3DCBCACONH, 3DHBHA(CBCACO)NH, 3D(H)C(CO)NH-TOCSY, H(CCO)NH-TOCSY, 2DTOCSY, 2D-CBHD, 2DCBHE, 2DTOCSY |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 600 |
2 | Bruker | DRX | 500 |
NMR Refinement | ||
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Method | Details | Software |
CNS 1.1 | simulated annealing | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 2.5 | Bruker |
2 | processing | NMRPipe | Frank Delaglio Stephan Grzeiek, Guang Zhu, Geerten W. Vuister, John Pfeifer, and Ad Bax | |
3 | processing | Sparky | 3 | T. D. Goddard and D. G. Kneller, SPARKY 3, University of California, San Francisco |
4 | structure solution | CNS | 1.1 | A. T. Brunger, P. D. Adams, G. M. Clore, W. L. Delano, P. Gros, R. W. Grosse-Kunsteve, J. S. Jiang, J. Kuszewski, M. Nilges, N. S. Pannu, R. J.Read, L. M. Rice, T. Simonson, G. L. Warren |
5 | refinement | CNS | 1.1 | A. T. Brunger, P. D. Adams, G. M. Clore, W. L. Delano, P. Gros, R. W. Grosse-Kunsteve, J. S. Jiang, J. Kuszewski, M. Nilges, N. S. Pannu, R. J.Read, L. M. Rice, T. Simonson, G. L. Warren |