7JZW | pdb_00007jzw

Cryo-EM structure of CRISPR-Cas surveillance complex with AcrIF4


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth C]SCOP2B SuperfamilyCRISPR-associated proteins 8052171 3001554 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe7jzwA1 A: a+b complex topologyX: Cas8-likeH: Cas8f/Csy1 (From Topology)T: Cas8f/Csy1F: F_UNCLASSIFIEDECOD (1.6)
B [auth C]Cas_Csy4_Ce7jzwC2 A: a+b two layersX: Alpha-beta plaitsH: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)T: CRISPR transcript (pre-crRNA) processing endoribonuclease-relatedF: Cas_Csy4_CECOD (1.6)
B [auth C]Cas_Csy4_Ne7jzwC1 A: a+b two layersX: Alpha-beta plaitsH: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology)T: CRISPR transcript (pre-crRNA) processing endoribonuclease-relatedF: Cas_Csy4_NECOD (1.6)
C [auth B]F_UNCLASSIFIEDe7jzwB1 A: a+b two layersX: Alpha-beta plaitsH: CRISPR system Cas5 homologs (From Topology)T: CRISPR system Cas5 homologsF: F_UNCLASSIFIEDECOD (1.6)
D [auth E]F_UNCLASSIFIEDe7jzwE1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7f/Csy3F: F_UNCLASSIFIEDECOD (1.6)
E [auth D]F_UNCLASSIFIEDe7jzwD1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7f/Csy3F: F_UNCLASSIFIEDECOD (1.6)
FF_UNCLASSIFIEDe7jzwF1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7f/Csy3F: F_UNCLASSIFIEDECOD (1.6)
GF_UNCLASSIFIEDe7jzwG1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7f/Csy3F: F_UNCLASSIFIEDECOD (1.6)
HF_UNCLASSIFIEDe7jzwH1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7f/Csy3F: F_UNCLASSIFIEDECOD (1.6)
IF_UNCLASSIFIEDe7jzwI1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7f/Csy3F: F_UNCLASSIFIEDECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth C]3.30.70.2540 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CRISPR-associated endoribonuclease Cas6/Csy4CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF09611CRISPR-associated protein (Cas_Csy1) (Cas_Csy1)CRISPR-associated protein (Cas_Csy1)- Family
B [auth C]PF09618CRISPR-associated protein (Cas_Csy4) (Cas_Csy4)CRISPR-associated protein (Cas_Csy4)- Family
C [auth B]PF09614CRISPR-associated protein (Cas_Csy2) (Cas_Csy2)CRISPR-associated protein (Cas_Csy2)- Family
PF09615CRISPR-associated protein (Cas_Csy3) (Cas_Csy3)CRISPR-associated protein (Cas_Csy3)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
CRISPR type I-F/YPEST-associated protein Csy1- -
B [auth C]CRISPR-associated endonuclease Cas6/Csy4 -
C [auth B]CRISPR type I-F/YPEST-associated protein Csy2- -
CRISPR type I-F/YPEST-associated protein Csy3- -
Type I-F anti-CRISPR protein- - -
K [auth M]CRISPR repeat sequence---