Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd5vu4b_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Dd5vu4d_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Fd5vu4f_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Ad5vu4a1 All beta proteins Viral protein domain Viral protein domain automated matches automated matches (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Ad5vu4a2 Artifacts Tags Tags Tags N-terminal Tags (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Cd5vu4c1 All beta proteins Viral protein domain Viral protein domain automated matches automated matches (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Cd5vu4c2 Artifacts Tags Tags Tags N-terminal Tags (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Ed5vu4e1 All beta proteins Viral protein domain Viral protein domain automated matches automated matches (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Ed5vu4e2 Artifacts Tags Tags Tags N-terminal Tags (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyInfluenza hemagglutinin (stalk) 8088048 3001616 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyInfluenza hemagglutinin (stalk) 8088048 3001616 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyInfluenza hemagglutinin (stalk) 8088048 3001616 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8094281 3001342 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8094281 3001342 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8094281 3001342 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BHemagglutinin_2nde5vu4B1 A: alpha bundlesX: Hemagglutinin HA2 chain (From Topology)H: Hemagglutinin HA2 chain (From Topology)T: Hemagglutinin HA2 chainF: Hemagglutinin_2ndECOD (1.6)
DHemagglutinin_2nde5vu4D1 A: alpha bundlesX: Hemagglutinin HA2 chain (From Topology)H: Hemagglutinin HA2 chain (From Topology)T: Hemagglutinin HA2 chainF: Hemagglutinin_2ndECOD (1.6)
FHemagglutinin_2nde5vu4F1 A: alpha bundlesX: Hemagglutinin HA2 chain (From Topology)H: Hemagglutinin HA2 chain (From Topology)T: Hemagglutinin HA2 chainF: Hemagglutinin_2ndECOD (1.6)
AHemagglutinin_1ste5vu4A1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
CHemagglutinin_1ste5vu4C1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
EHemagglutinin_1ste5vu4E1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, D, F
PF00509Haemagglutinin (Hemagglutinin)Haemagglutinin- Family
A, C, E
PF00509Haemagglutinin (Hemagglutinin)Haemagglutinin- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, D, F
Hemagglutinin HA2 chain
A, C, E
Hemagglutinin HA1 chain