Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5vtwa1 All beta proteins Viral protein domain Viral protein domain automated matches automated matches (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Ad5vtwa2 Artifacts Tags Tags Tags N-terminal Tags (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Cd5vtwc1 All beta proteins Viral protein domain Viral protein domain automated matches automated matches (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Cd5vtwc2 Artifacts Tags Tags Tags N-terminal Tags (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Ed5vtwe1 All beta proteins Viral protein domain Viral protein domain automated matches automated matches (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Ed5vtwe2 Artifacts Tags Tags Tags N-terminal Tags (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Dd5vtwd_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Bd5vtwb_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)
Fd5vtwf_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) (Influenza A virus (A/Hong Kong/1/1968(H3N2)) ) [TaxId: 506350 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8094281 3001342 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8094281 3001342 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8094281 3001342 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyInfluenza hemagglutinin (stalk) 8088048 3001616 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyInfluenza hemagglutinin (stalk) 8088048 3001616 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyInfluenza hemagglutinin (stalk) 8088048 3001616 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHemagglutinin_1ste5vtwA1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
CHemagglutinin_1ste5vtwC1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
EHemagglutinin_1ste5vtwE1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
DHemagglutinin_2nde5vtwD1 A: alpha bundlesX: Hemagglutinin HA2 chain (From Topology)H: Hemagglutinin HA2 chain (From Topology)T: Hemagglutinin HA2 chainF: Hemagglutinin_2ndECOD (1.6)
BHemagglutinin_2nde5vtwB1 A: alpha bundlesX: Hemagglutinin HA2 chain (From Topology)H: Hemagglutinin HA2 chain (From Topology)T: Hemagglutinin HA2 chainF: Hemagglutinin_2ndECOD (1.6)
FHemagglutinin_2nde5vtwF1 A: alpha bundlesX: Hemagglutinin HA2 chain (From Topology)H: Hemagglutinin HA2 chain (From Topology)T: Hemagglutinin HA2 chainF: Hemagglutinin_2ndECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E
PF00509Haemagglutinin (Hemagglutinin)Haemagglutinin- Family
B, D, F
PF00509Haemagglutinin (Hemagglutinin)Haemagglutinin- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E
Hemagglutinin HA1 chain
B, D, F
Hemagglutinin HA2 chain