2DUR | pdb_00002dur

Crystal structure of VIP36 exoplasmic/lumenal domain, Ca2+/Man2-bound form


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyConcanavalin A-like lectins/glucanases 8086356 3000120 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyConcanavalin A-like lectins/glucanases 8086356 3000120 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALectin_leg-likee2durA1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Concanavalin A-like lectins/glucanasesF: Lectin_leg-likeECOD (1.6)
BLectin_leg-likee2durB1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Concanavalin A-like lectins/glucanasesF: Lectin_leg-likeECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.200 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
B2.60.120.200 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF03388Legume-like lectin family (Lectin_leg-like)Legume-like lectin familyLectins are structurally diverse proteins that bind to specific carbohydrates. This family includes the VIP36 Swiss:P49256 and ERGIC-53 Swiss:P49257 lectins. These two proteins were the first recognised members of a family of animal lectins similar ( ...Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Vesicular integral-membrane protein VIP36