1SM1 | pdb_00001sm1

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTIN

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
J [auth C]	d1sm1c_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
K [auth D]	d1sm1d_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
L [auth E]	d1sm1e_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
M [auth F]	d1sm1f_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
N [auth G]	d1sm1g_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
O [auth H]	d1sm1h_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
P [auth I]	d1sm1i_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
Q [auth J]	d1sm1j_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
R [auth K]	d1sm1k_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
S [auth L]	d1sm1l_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
B [auth 1]	d1sm11_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
T [auth M]	d1sm1m_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
U [auth N]	d1sm1n_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
V [auth O]	d1sm1o_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
W [auth P]	d1sm1p_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
X [auth Q]	d1sm1q_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
Y [auth R]	d1sm1r_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
Z [auth S]	d1sm1s_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
AA [auth T]	d1sm1t_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
BA [auth U]	d1sm1u_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
CA [auth W]	d1sm1w_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
C [auth 2]	d1sm12_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
DA [auth X]	d1sm1x_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
EA [auth Y]	d1sm1y_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
FA [auth Z]	d1sm1z_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
D [auth 3]	d1sm13_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
E [auth 4]	d1sm14_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
H [auth A]	d1sm1a_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
I [auth B]	d1sm1b_	Low resolution protein structures	Ribosome and ribosomal fragments	Ribosome and ribosomal fragments	Large subunit	Prokaryotic (50S subunit)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J [auth C]	SCOP2B Superfamily	Ribosomal protein L4	8038546	3001146	SCOP2B (2022-06-29)
K [auth D]	SCOP2B Superfamily	RL5-like	8038549	3001709	SCOP2B (2022-06-29)
L [auth E]	SCOP2B Superfamily	Ribosomal protein L6	8038556	3000724	SCOP2B (2022-06-29)
L [auth E]	SCOP2B Superfamily	Ribosomal protein L6	8038552	3000724	SCOP2B (2022-06-29)
M [auth F]	SCOP2B Superfamily	L9 N-domain-like	8070571	3000338	SCOP2B (2022-06-29)
N [auth G]	SCOP2B Superfamily	Ribosomal L11/L12e N-terminal domain-like	8033405	3000950	SCOP2B (2022-06-29)
N [auth G]	SCOP2B Superfamily	Ribosomal protein L11, C-terminal domain	8033402	3001186	SCOP2B (2022-06-29)
O [auth H]	SCOP2B Superfamily	Ribosomal protein L13	8038555	3001134	SCOP2B (2022-06-29)
P [auth I]	SCOP2B Superfamily	50S Ribosomal protein L14-like	8038558	3000433	SCOP2B (2022-06-29)
Q [auth J]	SCOP2B Superfamily	Ribosomal proteins L15p and L18e	8038561	3001045	SCOP2B (2022-06-29)
R [auth K]	SCOP2B Superfamily	Ribosomal protein L16p/L10e	8038562	3000884	SCOP2B (2022-06-29)
S [auth L]	SCOP2B Superfamily	Prokaryotic ribosomal protein L17	8038564	3000995	SCOP2B (2022-06-29)
B [auth 1]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8038526	3001320	SCOP2B (2022-06-29)
T [auth M]	SCOP2B Superfamily	Translational machinery components	8038566	3000571	SCOP2B (2022-06-29)
U [auth N]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8038569	3000334	SCOP2B (2022-06-29)
V [auth O]	SCOP2B Superfamily	Ribosomal protein L20	8038571	3000563	SCOP2B (2022-06-29)
W [auth P]	SCOP2B Superfamily	l21p-like	8038572	3002005	SCOP2B (2022-06-29)
X [auth Q]	SCOP2B Superfamily	Ribosomal protein L22	8038576	3001078	SCOP2B (2022-06-29)
Y [auth R]	SCOP2B Superfamily	Ribosomal proteins S24e, L23 and L15e	8038577	3000210	SCOP2B (2022-06-29)
Z [auth S]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8038578	3000334	SCOP2B (2022-06-29)
AA [auth T]	SCOP2B Superfamily	Ribosomal protein L25-like	8038580	3001161	SCOP2B (2022-06-29)
BA [auth U]	SCOP2B Superfamily	Ribosomal L27 protein-like	8038582	3000539	SCOP2B (2022-06-29)
CA [auth W]	SCOP2B Superfamily	Ribosomal protein L29 (L29p)	8038586	3000713	SCOP2B (2022-06-29)
DA [auth X]	SCOP2B Superfamily	Ribosomal protein L30p/L7e	8038590	3001378	SCOP2B (2022-06-29)
EA [auth Y]	SCOP2B Superfamily	L28p-like	8086128	3001966	SCOP2B (2022-06-29)
FA [auth Z]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8038593	3001320	SCOP2B (2022-06-29)
D [auth 3]	SCOP2B Superfamily	L35p-like	8038530	3000790	SCOP2B (2022-06-29)
E [auth 4]	SCOP2B Superfamily	Ribosomal protein L36	8038532	3001346	SCOP2B (2022-06-29)
H [auth A]	SCOP2B Superfamily	Nucleic acid-binding proteins	8038538	3000135	SCOP2B (2022-06-29)
H [auth A]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8038534	3000334	SCOP2B (2022-06-29)
I [auth B]	SCOP2B Superfamily	Translational proteins	8038543	3000811	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J [auth C]	Ribosomal_L4	e1sm1C1	A: a/b three-layered sandwiches	X: Ribosomal protein L4 (From Topology)	H: Ribosomal protein L4 (From Topology)	T: Ribosomal protein L4	F: Ribosomal_L4	ECOD (1.6)
K [auth D]	Ribosomal_L5_C	e1sm1D1	A: a+b two layers	X: Ribosomal protein L5 (From Topology)	H: Ribosomal protein L5 (From Topology)	T: Ribosomal protein L5	F: Ribosomal_L5_C	ECOD (1.6)
L [auth E]	Ribosomal_L6	e1sm1E1	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6	ECOD (1.6)
L [auth E]	Ribosomal_L6_1	e1sm1E2	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6_1	ECOD (1.6)
M [auth F]	Ribosomal_L9_N	e1sm1F1	A: a+b two layers	X: L9 N-domain-like	H: L9 N-domain-like (From Topology)	T: L9 N-domain-like	F: Ribosomal_L9_N	ECOD (1.6)
N [auth G]	Ribosomal_L11	e1sm1G1	A: alpha arrays	X: HTH	H: HTH	T: Ribosomal protein L11, C-terminal domain	F: Ribosomal_L11	ECOD (1.6)
N [auth G]	Ribosomal_L11_N	e1sm1G2	A: a+b two layers	X: Ribosomal protein L11/L12e N-terminal domain-like	H: Ribosomal protein L11/L12e N-terminal domain (From Topology)	T: Ribosomal protein L11/L12e N-terminal domain	F: Ribosomal_L11_N	ECOD (1.6)
O [auth H]	Ribosomal_L13	e1sm1H1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L13 and L16-A (From Topology)	T: Ribosomal protein L13 and L16-A	F: Ribosomal_L13	ECOD (1.6)
P [auth I]	Ribosomal_L14	e1sm1I1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_L14	ECOD (1.6)
Q [auth J]	Ribosomal_L27A	e1sm1J1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: Ribosomal_L27A	ECOD (1.6)
R [auth K]	Ribosomal_L16	e1sm1K1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal protein L10e	F: Ribosomal_L16	ECOD (1.6)
S [auth L]	Ribosomal_L17_1	e1sm1L1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Prokaryotic ribosomal protein L17 (From Topology)	T: Prokaryotic ribosomal protein L17	F: Ribosomal_L17_1	ECOD (1.6)
B [auth 1]	Ribosomal_L33	e1sm111	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L33	ECOD (1.6)
T [auth M]	Ribosomal_L18p	e1sm1M1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_L18p	ECOD (1.6)
U [auth N]	Ribosomal_L19	e1sm1N1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L19	ECOD (1.6)
V [auth O]	Ribosomal_L20	e1sm1O1	A: alpha arrays	X: PABP domain-like	H: Ribosomal protein L20 (From Topology)	T: Ribosomal protein L20	F: Ribosomal_L20	ECOD (1.6)
W [auth P]	Ribosomal_L21p	e1sm1P1	A: beta barrels	X: Ribosomal protein L21p (From Topology)	H: Ribosomal protein L21p (From Topology)	T: Ribosomal protein L21p	F: Ribosomal_L21p	ECOD (1.6)
X [auth Q]	Ribosomal_L22	e1sm1Q1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Ribosomal protein L22 (From Topology)	T: Ribosomal protein L22	F: Ribosomal_L22	ECOD (1.6)
Y [auth R]	Ribosomal_L23_2	e1sm1R1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_L23_2	ECOD (1.6)
Z [auth S]	ribosomal_L24_1	e1sm1S1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: ribosomal_L24_1	ECOD (1.6)
AA [auth T]	Ribosomal_L25p	e1sm1T2	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: Ribosomal_L25p	ECOD (1.6)
AA [auth T]	Ribosomal_TL5_C_1	e1sm1T1	A: a+b complex topology	X: Ribosomal protein TL5/L25 C-terminal domain-like	H: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)	T: Ribosomal protein TL5/L25 C-terminal domain-related	F: Ribosomal_TL5_C_1	ECOD (1.6)
BA [auth U]	Ribosomal_L27	e1sm1U1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal L27 protein	F: Ribosomal_L27	ECOD (1.6)
CA [auth W]	Ribosomal_L29	e1sm1W1	A: alpha bundles	X: Long alpha-hairpin	H: Ribosomal protein L29 (L29p) (From Topology)	T: Ribosomal protein L29 (L29p)	F: Ribosomal_L29	ECOD (1.6)
C [auth 2]	Ribosomal_L34	e1sm121	A: extended segments	X: 50S ribosomal protein L34 (From Topology)	H: 50S ribosomal protein L34 (From Topology)	T: 50S ribosomal protein L34	F: Ribosomal_L34	ECOD (1.6)
DA [auth X]	Ribosomal_L30	e1sm1X1	A: a+b two layers	X: Ribosomal protein L30p/L7e (From Topology)	H: Ribosomal protein L30p/L7e (From Topology)	T: Ribosomal protein L30p/L7e	F: Ribosomal_L30	ECOD (1.6)
EA [auth Y]	Ribosomal_L31	e1sm1Y1	A: few secondary structure elements	X: Ribosomal protein L31p (From Topology)	H: Ribosomal protein L31p (From Topology)	T: Ribosomal protein L31p	F: Ribosomal_L31	ECOD (1.6)
FA [auth Z]	Ribosomal_L32p	e1sm1Z1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L32p	ECOD (1.6)
D [auth 3]	Ribosomal_L35p	e1sm131	A: a+b two layers	X: Ribosomal protein L35p (From Topology)	H: Ribosomal protein L35p (From Topology)	T: Ribosomal protein L35p	F: Ribosomal_L35p	ECOD (1.6)
E [auth 4]	Ribosomal_L36	e1sm141	A: few secondary structure elements	X: Ribosomal protein L36 (From Topology)	H: Ribosomal protein L36 (From Topology)	T: Ribosomal protein L36	F: Ribosomal_L36	ECOD (1.6)
H [auth A]	Ribosomal_L2_1	e1sm1A1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_L2_1	ECOD (1.6)
H [auth A]	Ribosomal_L2_C	e1sm1A2	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L2_C	ECOD (1.6)
I [auth B]	Ribosomal_L3	e1sm1B1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Ribosomal_L3	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
J [auth C]	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family
K [auth D]	PF00281	Ribosomal protein L5 (Ribosomal_L5)	Ribosomal protein L5		Domain
K [auth D]	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain
L [auth E]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6		Domain
M [auth F]	PF01281	Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)	Ribosomal protein L9, N-terminal domain		Domain
N [auth G]	PF03946	Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)	Ribosomal protein L11, N-terminal domain	The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.	Domain
N [auth G]	PF00298	Ribosomal protein L11, RNA binding domain (Ribosomal_L11)	Ribosomal protein L11, RNA binding domain		Domain
O [auth H]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family
Q [auth J]	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins.	Domain
S [auth L]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family
B [auth 1]	PF00471	Ribosomal protein L33 (Ribosomal_L33)	Ribosomal protein L33	-	Family
U [auth N]	PF01245	Ribosomal protein L19 (Ribosomal_L19)	Ribosomal protein L19	-	Family
V [auth O]	PF00453	Ribosomal protein L20 (Ribosomal_L20)	Ribosomal protein L20	-	Family
W [auth P]	PF00829	Ribosomal prokaryotic L21 protein (Ribosomal_L21p)	Ribosomal prokaryotic L21 protein	-	Family
X [auth Q]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
Y [auth R]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
Z [auth S]	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)	Ribosomal proteins 50S L24/mitochondrial 39S L24	-	Family
Z [auth S]	PF00467	KOW motif (KOW)	KOW motif	-	Family
AA [auth T]	PF14693	Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)	Ribosomal protein TL5, C-terminal domain	This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...	This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.	Domain
AA [auth T]	PF01386	Ribosomal L25p family (Ribosomal_L25p)	Ribosomal L25p family	Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.	Domain
BA [auth U]	PF01016	Ribosomal L27 protein (Ribosomal_L27)	Ribosomal L27 protein	-	Family
CA [auth W]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
C [auth 2]	PF00468	Ribosomal protein L34 (Ribosomal_L34)	Ribosomal protein L34	-	Family
DA [auth X]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
EA [auth Y]	PF01197	Ribosomal protein L31 (Ribosomal_L31)	Ribosomal protein L31	-	Family
FA [auth Z]	PF01783	Ribosomal L32p protein family (Ribosomal_L32p)	Ribosomal L32p protein family	-	Family
D [auth 3]	PF01632	Ribosomal protein L35 (Ribosomal_L35p)	Ribosomal protein L35	-	Family
H [auth A]	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain		Domain
H [auth A]	PF00181	Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)	Ribosomal Proteins L2, RNA binding domain		Domain
I [auth B]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 0]	23S RIBOSOMAL RNA	-	-	-
J [auth C]	50S RIBOSOMAL PROTEIN L4	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
K [auth D]	50S RIBOSOMAL PROTEIN L5	RNA binding binding nucleic acid binding tRNA binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
L [auth E]	50S RIBOSOMAL PROTEIN L6	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process cytoplasmic translation metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
M [auth F]	50S RIBOSOMAL PROTEIN L9	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
N [auth G]	50S RIBOSOMAL PROTEIN L11	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
O [auth H]	50S RIBOSOMAL PROTEIN L13	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome rRNA binding	regulation of cellular process negative regulation of biological process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation regulation of cellular process negative regulation of biological process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
P [auth I]	50S RIBOSOMAL PROTEIN L14	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Q [auth J]	50S RIBOSOMAL PROTEIN L15	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
R [auth K]	50S RIBOSOMAL PROTEIN L16	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
S [auth L]	50S RIBOSOMAL PROTEIN L17	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
B [auth 1]	50S RIBOSOMAL PROTEIN L33	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
T [auth M]	50S RIBOSOMAL PROTEIN L18	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
U [auth N]	50S RIBOSOMAL PROTEIN L19	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
V [auth O]	50S RIBOSOMAL PROTEIN L20	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
W [auth P]	50S RIBOSOMAL PROTEIN L21	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
X [auth Q]	50S RIBOSOMAL PROTEIN L22	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Y [auth R]	50S RIBOSOMAL PROTEIN L23	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Z [auth S]	50S RIBOSOMAL PROTEIN L24	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
AA [auth T]	GENERAL STRESS PROTEIN CTC	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding tRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
BA [auth U]	50S RIBOSOMAL PROTEIN L27	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
CA [auth W]	50S RIBOSOMAL PROTEIN L29	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
C [auth 2]	50S RIBOSOMAL PROTEIN L34	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
DA [auth X]	50S RIBOSOMAL PROTEIN L30	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
EA [auth Y]	50S RIBOSOMAL PROTEIN L31	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
FA [auth Z]	50S RIBOSOMAL PROTEIN L32	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
D [auth 3]	50S RIBOSOMAL PROTEIN L35	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
E [auth 4]	50S RIBOSOMAL PROTEIN L36	structural molecule activity structural constituent of ribosome cation binding ion binding binding metal ion binding small molecule binding RNA binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
F [auth 5]	QUINUPRISTIN	-	-	-
G [auth 9]	5S RIBOSOMAL RNA	-	-	-
H [auth A]	50S RIBOSOMAL PROTEIN L2	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome transferase activity catalytic activity	biosynthetic process cytoplasmic translation metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
I [auth B]	50S RIBOSOMAL PROTEIN L3	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
J [auth C]	IPR013005	Large ribosomal subunit protein uL4-like	Family
J [auth C]	IPR002136	Large ribosomal subunit protein uL4	Family
J [auth C]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
K [auth D]	IPR022803	Large ribosomal subunit protein uL5 domain superfamily	Homologous Superfamily
K [auth D]	IPR031309	Large ribosomal subunit protein uL5, C-terminal	Domain
K [auth D]	IPR031310	Large ribosomal subunit protein uL5, N-terminal	Domain
K [auth D]	IPR020930	Large ribosomal subunit protein uL5, bacterial-type	Family
K [auth D]	IPR002132	Large ribosomal subunit protein uL5	Family
L [auth E]	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
L [auth E]	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
L [auth E]	IPR000702	Large ribosomal subunit protein uL6-like	Family
L [auth E]	IPR019906	Large ribosomal subunit protein uL6, bacterial-type	Family
M [auth F]	IPR009027	Large ribosomal subunit protein bL9/RNase H1, N-terminal	Homologous Superfamily
M [auth F]	IPR020594	Large ribosomal subunit protein bL9, bacteria/chloroplast	Family
M [auth F]	IPR036935	Large ribosomal subunit protein bL9, N-terminal domain superfamily	Homologous Superfamily
M [auth F]	IPR036791	Large ribosomal subunit protein bL9, C-terminal domain superfamily	Homologous Superfamily
M [auth F]	IPR020069	Large ribosomal subunit protein bL9, C-terminal	Domain
M [auth F]	IPR020070	Large ribosomal subunit protein bL9, N-terminal	Domain
M [auth F]	IPR000244	Large ribosomal subunit protein bL9	Family
N [auth G]	IPR020785	Large ribosomal subunit protein uL11, conserved site	Conserved Site
N [auth G]	IPR020783	Large ribosomal subunit protein uL11, C-terminal	Domain
N [auth G]	IPR000911	Ribosomal protein uL11	Family
N [auth G]	IPR036769	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Homologous Superfamily
N [auth G]	IPR006519	Large ribosomal subunit protein uL11, bacterial-type	Family
N [auth G]	IPR020784	Large ribosomal subunit protein uL11, N-terminal	Domain
N [auth G]	IPR036796	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Homologous Superfamily
O [auth H]	IPR023563	Large ribosomal subunit protein uL13, conserved site	Conserved Site
O [auth H]	IPR005822	Large ribosomal subunit protein uL13	Family
O [auth H]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
O [auth H]	IPR005823	Large ribosomal subunit protein uL13, bacterial-type	Family
P [auth I]	IPR005745	Large ribosomal subunit protein uL14, bacterial-type	Family
P [auth I]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
P [auth I]	IPR000218	Large ribosomal subunit protein uL14	Family
P [auth I]	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
Q [auth J]	IPR005749	Large ribosomal subunit protein uL15, bacterial-type	Family
Q [auth J]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
Q [auth J]	IPR030878	Large ribosomal subunit protein uL15	Family
Q [auth J]	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
Q [auth J]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
R [auth K]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
R [auth K]	IPR020798	Large ribosomal subunit protein uL16, conserved site	Conserved Site
R [auth K]	IPR000114	Large ribosomal subunit protein uL16, bacterial-type	Family
R [auth K]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
R [auth K]	IPR047873	Large ribosomal subunit protein uL16	Family
S [auth L]	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
S [auth L]	IPR047859	Large ribosomal subunit protein bL17, conserved site	Conserved Site
S [auth L]	IPR000456	Large ribosomal subunit protein bL17	Family
B [auth 1]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
B [auth 1]	IPR038584	Large ribosomal subunit protein bL33 superfamily	Homologous Superfamily
B [auth 1]	IPR001705	Large ribosomal subunit protein bL33	Family
B [auth 1]	IPR018264	Large ribosomal subunit protein bL33, conserved site	Conserved Site
T [auth M]	IPR005484	Large ribosomal subunit protein uL18, bacterial/plantae/animalia	Family
T [auth M]	IPR004389	Large ribosomal subunit protein uL18, bacterial-type	Family
U [auth N]	IPR001857	Large ribosomal subunit protein bL19	Family
U [auth N]	IPR038657	Large ribosomal subunit protein bL19 superfamily	Homologous Superfamily
U [auth N]	IPR018257	Large ribosomal subunit protein bL19, conserved site	Conserved Site
U [auth N]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
V [auth O]	IPR049946	Large ribosomal subunit protein bL20, conserved site	Conserved Site
V [auth O]	IPR035566	Ribosomal protein bL20, C-terminal	Homologous Superfamily
V [auth O]	IPR005813	Large ribosomal subunit protein bL20	Family
W [auth P]	IPR028909	Large ribosomal subunit protein bL21-like	Family
W [auth P]	IPR001787	Large ribosomal subunit protein bL21	Family
W [auth P]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
X [auth Q]	IPR047867	Large ribosomal subunit protein uL22, bacterial/organelle-type	Family
X [auth Q]	IPR018260	Large ribosomal subunit protein uL22, conserved site	Conserved Site
X [auth Q]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
X [auth Q]	IPR001063	Large ribosomal subunit protein uL22	Family
X [auth Q]	IPR005727	Large ribosomal subunit protein uL22, bacterial/chloroplast-type	Family
Y [auth R]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
Y [auth R]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
Y [auth R]	IPR001014	Large ribosomal subunit protein uL23, conserved site	Conserved Site
Y [auth R]	IPR013025	Large ribosomal subunit protein uL23-like	Family
Z [auth S]	IPR003256	Large ribosomal subunit protein uL24	Family
Z [auth S]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
Z [auth S]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
Z [auth S]	IPR005824	KOW	Domain
Z [auth S]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
Z [auth S]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
AA [auth T]	IPR011035	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	Homologous Superfamily
AA [auth T]	IPR001021	Ribosomal protein bL25, long-form	Family
AA [auth T]	IPR029751	Large ribosomal subunit protein bL25, L25 domain	Domain
AA [auth T]	IPR037121	Large ribosomal subunit protein bL25, C-terminal	Homologous Superfamily
AA [auth T]	IPR020057	Large ribosomal subunit protein bL25, beta domain	Domain
AA [auth T]	IPR050070	Bact_ribosom_prot_bL25	Unknown
AA [auth T]	IPR020056	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal	Homologous Superfamily
BA [auth U]	IPR001684	Large ribosomal subunit protein bL27	Family
BA [auth U]	IPR018261	Large ribosomal subunit protein bL27, conserved site	Conserved Site
CA [auth W]	IPR050063	Universal ribosomal protein uL29	Family
CA [auth W]	IPR001854	Large ribosomal subunit protein uL29	Family
CA [auth W]	IPR036049	Large ribosomal subunit protein uL29 superfamily	Homologous Superfamily
CA [auth W]	IPR018254	Large ribosomal subunit protein uL29, conserved site	Conserved Site
C [auth 2]	IPR020939	Large ribosomal subunit protein bL34, conserved site	Conserved Site
C [auth 2]	IPR000271	Large ribosomal subunit protein bL34	Family
DA [auth X]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
DA [auth X]	IPR005996	Large ribosomal subunit protein uL30, bacterial-type	Family
DA [auth X]	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain
EA [auth Y]	IPR002150	Large ribosomal subunit protein bL31 type A/B	Family
EA [auth Y]	IPR027491	Large ribosomal subunit protein bL31 type A	Family
EA [auth Y]	IPR042105	Large ribosomal subunit protein bL31 superfamily	Homologous Superfamily
EA [auth Y]	IPR034704	Large ribosomal subunit protein bL28/bL31-like superfamily	Homologous Superfamily
FA [auth Z]	IPR002677	Large ribosomal subunit protein bL32	Family
FA [auth Z]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
FA [auth Z]	IPR044957	Large ribosomal subunit protein bL32, bacterial type	Family
D [auth 3]	IPR021137	Large ribosomal subunit protein bL35-like	Family
D [auth 3]	IPR018265	Large ribosomal subunit protein bL35, conserved site	Conserved Site
D [auth 3]	IPR001706	Large ribosomal subunit protein bL35	Family
D [auth 3]	IPR037229	Large ribosomal subunit protein bL35 superfamily	Homologous Superfamily
E [auth 4]	IPR000473	Large ribosomal subunit protein bL36	Family
E [auth 4]	IPR035977	Large ribosomal subunit protein bL36 superfamily	Homologous Superfamily
H [auth A]	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
H [auth A]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
H [auth A]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
H [auth A]	IPR022671	Large ribosomal subunit protein uL2, conserved site	Conserved Site
H [auth A]	IPR005880	Large ribosomal subunit protein uL2, bacterial/organellar-type	Family
H [auth A]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
H [auth A]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
H [auth A]	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
H [auth A]	IPR002171	Large ribosomal subunit protein uL2	Family
I [auth B]	IPR019926	Large ribosomal subunit protein uL3, conserved site	Conserved Site
I [auth B]	IPR019927	Large ribosomal subunit protein uL3, bacterial/organelle-type	Family
I [auth B]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
I [auth B]	IPR000597	Large ribosomal subunit protein uL3	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
F [auth 5]	004
F [auth 5]	DBB	RESID: AA0112 PSI-MOD : (2S,3S,2'R)-3-methyllanthionine MOD:00121
F [auth 5]	MHT	RESID: AA0112
F [auth 5]	MHU	Parent Component: PHE RESID: AA0112
F [auth 5]	MHV	RESID: AA0112
F [auth 5]	MHW	RESID: AA0112