1L0V
Quinol-Fumarate Reductase with Menaquinol Molecules
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | L-aspartate oxidase C-terminal domain-like | 8056077 | 3000021 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Succinate dehydrogenase/fumarate reductase domain-like | 8056076 | 3000054 | SCOP2B (2022-06-29) |
E [auth M] | SCOP2B Superfamily | L-aspartate oxidase C-terminal domain-like | 8056077 | 3000021 | SCOP2B (2022-06-29) |
E [auth M] | SCOP2B Superfamily | Succinate dehydrogenase/fumarate reductase domain-like | 8056076 | 3000054 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | alpha-helical ferredoxin | 8003619 | 3000026 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | 2Fe-2S ferredoxin-like | 8003622 | 3000113 | SCOP2B (2022-06-29) |
F [auth N] | SCOP2B Superfamily | 2Fe-2S ferredoxin-like | 8003622 | 3000113 | SCOP2B (2022-06-29) |
F [auth N] | SCOP2B Superfamily | alpha-helical ferredoxin | 8003619 | 3000026 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Fumarate reductase respiratory complex transmembrane subunits | 8040223 | 3000518 | SCOP2B (2022-06-29) |
H [auth P] | SCOP2B Superfamily | Fumarate reductase respiratory complex transmembrane subunits | 8040223 | 3000518 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Fumarate reductase respiratory complex transmembrane subunits | 8040234 | 3000518 | SCOP2B (2022-06-29) |
G [auth O] | SCOP2B Superfamily | Fumarate reductase respiratory complex transmembrane subunits | 8040234 | 3000518 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Succ_DH_flav_C | e1l0vA1 | A: alpha bundles | X: Spectrin repeat-like | H: Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain (From Topology) | T: Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | F: Succ_DH_flav_C | ECOD (1.6) |
A | FAD_binding_2 | e1l0vA2 | A: a+b complex topology | X: Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain (From Topology) | H: Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain (From Topology) | T: Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | F: FAD_binding_2 | ECOD (1.6) |
A | FAD_binding_3_1st | e1l0vA3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: FAD_binding_3_1st | ECOD (1.6) |
E [auth M] | Succ_DH_flav_C | e1l0vM1 | A: alpha bundles | X: Spectrin repeat-like | H: Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain (From Topology) | T: Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | F: Succ_DH_flav_C | ECOD (1.6) |
E [auth M] | FAD_binding_2 | e1l0vM2 | A: a+b complex topology | X: Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain (From Topology) | H: Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain (From Topology) | T: Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | F: FAD_binding_2 | ECOD (1.6) |
E [auth M] | FAD_binding_3_1st | e1l0vM3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: FAD_binding_3_1st | ECOD (1.6) |
B | Fer4_8 | e1l0vB1 | A: alpha arrays | X: alpha-helical ferredoxin-like | H: alpha-helical ferredoxin (From Topology) | T: alpha-helical ferredoxin | F: Fer4_8 | ECOD (1.6) |
B | Fer2_3 | e1l0vB2 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Fer2_3 | ECOD (1.6) |
F [auth N] | Fer4_8 | e1l0vN1 | A: alpha arrays | X: alpha-helical ferredoxin-like | H: alpha-helical ferredoxin (From Topology) | T: alpha-helical ferredoxin | F: Fer4_8 | ECOD (1.6) |
F [auth N] | Fer2_3 | e1l0vN2 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Fer2_3 | ECOD (1.6) |
D | Fumarate_red_D | e1l0vD1 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle (From Homology) | H: Transmembrane heme-binding four-helical bundle | T: Fumarate reductase respiratory complex transmembrane subunits | F: Fumarate_red_D | ECOD (1.6) |
H [auth P] | Fumarate_red_D | e1l0vP1 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle (From Homology) | H: Transmembrane heme-binding four-helical bundle | T: Fumarate reductase respiratory complex transmembrane subunits | F: Fumarate_red_D | ECOD (1.6) |
C | Fumarate_red_C | e1l0vC1 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle (From Homology) | H: Transmembrane heme-binding four-helical bundle | T: Fumarate reductase respiratory complex transmembrane subunits | F: Fumarate_red_C | ECOD (1.6) |
G [auth O] | Fumarate_red_C | e1l0vO1 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle (From Homology) | H: Transmembrane heme-binding four-helical bundle | T: Fumarate reductase respiratory complex transmembrane subunits | F: Fumarate_red_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, E [auth M] | PF02910 | Fumarate reductase flavoprotein C-term (Succ_DH_flav_C) | Fumarate reductase flavoprotein C-term | This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases. | Domain |
A, E [auth M] | PF00890 | FAD binding domain (FAD_binding_2) | FAD binding domain | - | Family |
B, F [auth N] | PF13085 | 2Fe-2S iron-sulfur cluster binding domain (Fer2_3) | 2Fe-2S iron-sulfur cluster binding domain | The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which abeta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. | Domain |
B, F [auth N] | PF13237 | 4Fe-4S dicluster domain (Fer4_10) | 4Fe-4S dicluster domain | This family includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. The structure of the domain is an alpha-antiparallel beta sandwich. | Domain |
D, H [auth P] | PF02313 | Fumarate reductase subunit D (Fumarate_red_D) | Fumarate reductase subunit D | Fumarate reductase is a membrane-bound flavoenzyme consisting of four subunits, A-B. A and B comprise the membrane-extrinsic catalytic domain and C and D link the catalytic centres to the electron-transport chain. This family consists of the 13kD hy ... | Domain |
C, G [auth O] | PF02300 | Fumarate reductase subunit C (Fumarate_red_C) | Fumarate reductase subunit C | Fumarate reductase is a membrane-bound flavoenzyme consisting of four subunits, A-B. A and B comprise the membrane-extrinsic catalytic domain and C and D link the catalytic centres to the electron-transport chain. This family consists of the 15kD hy ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Electron Transport Chain Complexes: Complex II | Native Fumarate Reductase Complex |