1HL5

The Structure of Holo Type Human Cu, Zn Superoxide Dismutase


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1hl5a_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd1hl5c_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Gd1hl5g_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd1hl5h_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Id1hl5i_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Jd1hl5j_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Kd1hl5k_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ld1hl5l_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Nd1hl5n_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Pd1hl5p_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Qd1hl5q_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
R [auth S]d1hl5s_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd1hl5b_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd1hl5d_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ed1hl5e_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Fd1hl5f_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Md1hl5m_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Od1hl5o_ All beta proteins Immunoglobulin-like beta-sandwich Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase-like Cu,Zn superoxide dismutase, SOD HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
R [auth S]SCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyCu, Zn superoxide dismutase-like 8055253 3002059 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASod_Cue1hl5A1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
CSod_Cue1hl5C1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
GSod_Cue1hl5G1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
HSod_Cue1hl5H1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
ISod_Cue1hl5I1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
JSod_Cue1hl5J1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
KSod_Cue1hl5K1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
LSod_Cue1hl5L1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
NSod_Cue1hl5N1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
PSod_Cue1hl5P1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
QSod_Cue1hl5Q1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
R [auth S]Sod_Cue1hl5S1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
BSod_Cue1hl5B1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
DSod_Cue1hl5D1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
ESod_Cue1hl5E1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
FSod_Cue1hl5F1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
MSod_Cue1hl5M1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)
OSod_Cue1hl5O1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: Sod_CuECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
C2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
G2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
H2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
I2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
J2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
K2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
L2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
N2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
P2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
Q2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
R [auth S]2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
B2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
D2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
E2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
F2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
M2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)
O2.60.40.200 Mainly Beta Sandwich Immunoglobulin-like Superoxide dismutase, copper/zinc binding domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B,
C,
D,
E,
PF00080Copper/zinc superoxide dismutase (SODC) (Sod_Cu)Copper/zinc superoxide dismutase (SODC)superoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the human SO ...superoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the human SOD1 gene cause familial amyotrophic lateral sclerosis (Lou Gehrig's disease). Structure is an eight-stranded beta sandwich, similar to the immunoglobulin fold.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B,
C,
D,
E,
SUPEROXIDE DISMUTASE

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A,
B,
C,
D,
E,
PharosP00441