Download MendeleyThe Crystal Structure of Hypothetical Protein SP_1558 from Streptococcus pneumoniae
Kim, Y., Zhang, D., Zhou, M., Clancy, S., Joachimiak, A.To be published.
2HNG | pdb_00002hng
The Crystal Structure of Protein of Unknown Function SP1558 from Streptococcus pneumoniae
- PDB DOI: https://doi.org/10.2210/pdb2HNG/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Streptococcus pneumoniae TIGR4
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2006-07-12 Released: 2006-08-15
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.63 Å
- R-Value Free: 0.231 (Depositor), 0.236 (DCC)
- R-Value Work: 0.189 (Depositor), 0.190 (DCC)
- R-Value Observed: 0.193 (Depositor)
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hypothetical protein | 127 | Streptococcus pneumoniae TIGR4 | Mutation(s): 3 Gene Names: SP_1558 |  | |
UniProt | |||||
Find proteins for A0A0H2UQV3 (Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)) Explore A0A0H2UQV3 Go to UniProtKB: A0A0H2UQV3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0H2UQV3 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.63 Å
- R-Value Free: 0.231 (Depositor), 0.236 (DCC)
- R-Value Work: 0.189 (Depositor), 0.190 (DCC)
- R-Value Observed: 0.193 (Depositor)
Space Group: P 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 43.03 | α = 90 |
| b = 42.581 | β = 90 |
| c = 72.379 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| HKL-3000 | phasing |
| SHELXE | model building |
| SOLVE | phasing |
| RESOLVE | phasing |
| ARP/wARP | model building |
Entry History
Deposition Data
- Released Date: 2006-08-15 Deposition Author(s): Kim, Y., Zhang, D., Zhou, M., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2006-08-15
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.3: 2024-11-20
Changes: Data collection, Database references, Derived calculations, Structure summary
