Download MendeleyCrystal structure of conserved hypothetical protein TA0108 from Thermoplasma acidophilum
Osipiuk, J., Evdokimova, E., Savchenko, A., Edwards, A., Joachimiak, A.To be published.
1RLK | pdb_00001rlk
Structure of Conserved Protein of Unknown Function TA0108 from Thermoplasma acidophilum
- PDB DOI: https://doi.org/10.2210/pdb1RLK/pdb
- Classification: Structural genomics, unknown function
- Organism(s): Thermoplasma acidophilum
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2003-11-25 Released: 2003-12-30
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.95 Å
- R-Value Free: 0.239 (Depositor), 0.220 (DCC)
- R-Value Work: 0.212 (Depositor), 0.220 (DCC)
- R-Value Observed: 0.216 (Depositor)
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hypothetical protein Ta0108 | 117 | Thermoplasma acidophilum | Mutation(s): 0 Gene Names: TA0108 EC: 3.1.1.29 |  | |
UniProt | |||||
Find proteins for Q9HLW6 (Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)) Explore Q9HLW6 Go to UniProtKB: Q9HLW6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9HLW6 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | B [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| GOL Query on GOL | C [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.95 Å
- R-Value Free: 0.239 (Depositor), 0.220 (DCC)
- R-Value Work: 0.212 (Depositor), 0.220 (DCC)
- R-Value Observed: 0.216 (Depositor)
Space Group: P 31 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 43.456 | α = 90 |
| b = 43.456 | β = 90 |
| c = 103.381 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| SHELXD | phasing |
| CNS | phasing |
Entry History
Deposition Data
- Released Date: 2003-12-30 Deposition Author(s): Osipiuk, J., Evdokimova, E., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2003-12-30
Type: Initial release - Version 1.1: 2008-04-29
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 1.3: 2024-02-14
Changes: Data collection, Database references, Derived calculations
