RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Source Organism Taxonomy Name (Full Lineage) = "Thermosynechococcus vestitus BP-1"

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 192 Structures.

Refinements

Structure Determination Methodology

experimental (192)

Scientific Name of Source Organism

	Thermosynechococcus vestitus BP-1 (192)
	Thermosynechococcus vestitus (6)
	Thermostichus vulcanus (2)
	Arabidopsis thaliana (1)
	Spinacia oleracea (1)

Taxonomy

	Bacteria (192)
	Eukaryota (2)

Experimental Method

	X-RAY DIFFRACTION (154)
	ELECTRON MICROSCOPY (23)
	SOLUTION NMR (14)
	SOLID-STATE NMR (1)

Polymer Entity Type

	Protein (192)
	DNA (2)
	NA-hybrid (1)
	RNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (13)
	1.5 - 2.0 (31)
	2.0 - 2.5 (61)
	2.5 - 3.0 (27)
	3.0 - 3.5 (19)
	3.5 - 4.0 (12)
	4.0 - 4.5 (2)
	> 4.5 (12)

Release Date

	2000 - 2004 (6)
	2005 - 2009 (8)
	2010 - 2014 (42)
	2015 - 2019 (68)
	2020 - 2024 (68)

Enzyme Classification Name

	Oxidoreductases (90)
	Translocases (10)
	Transferases (15)
	Hydrolases (9)
	Lyases (8)
	Isomerases (2)
	Ligases (1)

Membrane Protein Annotation

	PDBTM (56)
	mpstruc (42)
	MemProtMD (35)
	OPM (30)

Symmetry Type

	Asymmetric (82)
	Cyclic (93)
	Dihedral (23)
	Tetrahedral (1)

SCOP Classification

	Membrane and cell surface proteins and peptides (21)
	Alpha and beta proteins (a+b) (25)
	All alpha proteins (29)
	All beta proteins (12)
	Artifacts (15)
	Low resolution protein structures (1)
	Alpha and beta proteins (a/b) (8)
	Multi-domain proteins (alpha and beta) (4)

AllSelected

1 to 25 of 192 Structures

Page 1 of 8

Sort by

Explore in 3D

1IZL \| pdb_00001izl	Download File View File

Crystal Structure of Photosystem II

Kamiya, N., Shen, J.-R.

(2003) Proc Natl Acad Sci U S A 100: 98-103

Released	2003-01-14
Method	X-RAY DIFFRACTION 3.7 Å
Organisms	Thermostichus vulcanus Thermosynechococcus vestitus BP-1
Macromolecule	Unique protein chains: 14
Unique Ligands	BCR, CLA, FE, HEM, MN, PHO, PLA

Explore in 3D

1Q6A \| pdb_00001q6a	Download File View File

Solution Structure of the C-terminal Domain of Thermosynechococcus elongatus KaiA (ThKaiA180C); Averaged Minimized Structure

Vakonakis, I., Sun, J., Holzenburg, A., Golden, S.S., LiWang, A.C.

(2004) Proc Natl Acad Sci U S A 101: 1479-1484

Released	2003-08-19
Method	SOLUTION NMR
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Circadian clock protein KaiA homolog (protein)

Explore in 3D

1Q6B \| pdb_00001q6b	Download File View File

Solution Structure of the C-terminal Domain of Thermosynechococcus elongatus KaiA (ThKaiA180C); Ensemble of 25 Structures

Vakonakis, I., Sun, J., Golden, S.S., Holzenburg, A., LiWang, A.C.

(2004) Proc Natl Acad Sci U S A 101: 1479-1484

Released	2003-08-19
Method	SOLUTION NMR
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Circadian clock protein KaiA homolog (protein)

Explore in 3D

1SUY \| pdb_00001suy	Download File View File

NMR structure of the ThKaiA180C-CIIABD complex (average minimized structure)

Vakonakis, I., LiWang, A.C.

(2004) Proc Natl Acad Sci U S A 101: 10925-10930

Released	2004-08-03
Method	SOLUTION NMR
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	circadian clock protein KaiA (protein) circadian clock protein KaiC (protein)

Explore in 3D

1SV1 \| pdb_00001sv1	Download File View File

NMR structure of the ThKaiA180C-CIIABD complex (25-structure ensemble)

Vakonakis, I., LiWang, A.C.

(2004) Proc Natl Acad Sci U S A 101: 10925-10930

Released	2004-08-03
Method	SOLUTION NMR
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Circadian clock protein KaiA (protein) Circadian clock protein KaiC (protein)

Explore in 3D

1V2Z \| pdb_00001v2z	Download File View File

Crystal structure of the C-terminal domain of Thermosynechococcus elongatus BP-1 KaiA

Uzumaki, T., Fujita, M., Nakatsu, T., Hayashi, F., Shibata, H., Itoh, N., Kato, H., Ishiura, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2004) Nat Struct Mol Biol 11: 623-631

Released	2004-06-01
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	circadian clock protein KaiA homolog (protein)

Explore in 3D

1VGL \| pdb_00001vgl	Download File View File

Crystal structure of tetrameric KaiB from T.elongatus BP-1

Iwase, R., Imada, K., Hayashi, F., Uzumaki, T., Namba, K., Ishiura, M.

(2005) J Biological Chem 280: 43141-43149

Released	2005-08-16
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Circadian clock protein kaiB (protein)
Unique Ligands	HG

Explore in 3D

1X0G \| pdb_00001x0g	Download File View File

Crystal Structure of IscA with the [2Fe-2S] cluster

Morimoto, K., Yamashita, E., Kondou, Y., Lee, S.J., Tsukihara, T., Nakai, M.

(2006) J Mol Biology 360: 117-132

Released	2006-06-06
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	IscA (protein)
Unique Ligands	FES, NA

Explore in 3D

1X0P \| pdb_00001x0p	Download File View File

Structure of a cyanobacterial BLUF protein, Tll0078

Kita, A., Okajima, K., Morimoto, Y., Ikeuchi, M., Miki, K.

(2005) J Mol Biology 349: 1-9

Released	2005-06-07
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	hypothetical protein Tll0078 (protein)
Unique Ligands	FAD

Explore in 3D

2AXT \| pdb_00002axt	Download File View File

Crystal Structure of Photosystem II from Thermosynechococcus elongatus

Loll, B., Kern, J., Saenger, W., Zouni, A., Biesiadka, J.

(2005) Nature 438: 1040-1044

Released	2005-12-27
Method	X-RAY DIFFRACTION 3 Å
Organisms	Thermosynechococcus vestitus Thermosynechococcus vestitus BP-1
Macromolecule	Unique protein chains: 18
Unique Ligands	BCR, BCT, CA, CLA, DGD, FE2, HEM, LHG, LMT, MGE, OEC, PHO, PQ9, SQD, UNL

Explore in 3D

2C41 \| pdb_00002c41	Download File View File

X-ray structure of Dps from Thermosynechococcus elongatus

Ilari, A., Franceschini, S., Ceci, P., Chiancone, E.

(2006) FEBS J 273: 4913

Released	2006-10-11
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	DPS FAMILY DNA-BINDING STRESS RESPONSE PROTEIN (protein)
Unique Ligands	CL, PG4, PGE

Explore in 3D

2L8V \| pdb_00002l8v	Download File View File

Solution NMR structure of the phycobilisome linker polypeptide domain of CpcC (20-153) from Thermosynechococcus elongatus, Northeast Structural Genomics Consortium Target TeR219A

Ramelot, T.A., Yang, Y., Cort, J.R., Lee, D., Ciccosanti, C., Hamilton, K., Acton, T.B., Xiao, R., Everett, J.K., Montelione, G.T., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2011-02-09
Method	SOLUTION NMR
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod (protein)

Explore in 3D

2M7U \| pdb_00002m7u	Download File View File

Blue Light-Absorbing State of TePixJ, an Active Cyanobacteriochrome Domain

Cornilescu, G., Cornilescu, C.C., Burgie, S.E., Walker, J.M., Markley, J.L., Ulijasz, A.T., Vierstra, R.D.

To be published

Released	2014-01-01
Method	SOLUTION NMR
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Methyl-accepting chemotaxis protein (protein)
Unique Ligands	VRB

Explore in 3D

2M7V \| pdb_00002m7v	Download File View File

Green Light-Absorbing State of TePixJ, an Active Cyanobacteriochrome Domain

Cornilescu, G., Cornilescu, C.C., Burgie, S.E., Walker, J.M., Markley, J.L., Ulijasz, A.T., Vierstra, R.D.

To be published

Released	2014-01-01
Method	SOLUTION NMR
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Methyl-accepting chemotaxis protein (protein)
Unique Ligands	PVN

Explore in 3D

2N5U \| pdb_00002n5u	Download File View File

Solution structure of the cyanobacterial cytochrome b6f complex subunit PetP

Veit, S., Ikegami, T., Roegner, M., Stoll, R.

(2016) Biochim Biophys Acta 1857: 705-714

Released	2016-04-13
Method	SOLUTION NMR
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Tsr0524 protein (protein)

Explore in 3D

2RQ6 \| pdb_00002rq6	Download File View File

Solution structure of the epsilon subunit of the F1-atpase from thermosynechococcus elongatus BP-1

Yagi, H., Konno, H., Murakami-Fuse, T., Oroguchi, H., Akutsu, T., Ikeguchi, M., Hisabori, T.

(2010) Biochem J 425: 85-94

Released	2010-01-12
Method	SOLUTION NMR
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	ATP synthase epsilon chain (protein)

Explore in 3D

2RQ7 \| pdb_00002rq7	Download File View File

Solution structure of the epsilon subunit chimera combining the N-terminal beta-sandwich domain from T. Elongatus bp-1 f1 and the C-terminal alpha-helical domain from spinach chloroplast F1

Yagi, H., Konno, H., Murakami-Fuse, T., Oroguchi, H., Akutsu, T., Ikeguchi, M., Hisabori, T.

(2010) Biochem J 425: 85-94

Released	2010-01-12
Method	SOLUTION NMR
Organisms	Spinacia oleracea Thermosynechococcus vestitus BP-1
Macromolecule	ATP synthase epsilon chain,ATP synthase epsilon chain, chloroplastic (protein)

Explore in 3D

2V8A \| pdb_00002v8a	Download File View File

The structure of Thermosynechococcus elongatus allophycocyanin at 3.5 Angstroems.

Murray, J.W., Maghlaoui, K., Barber, J.

(2007) Acta Crystallogr Sect F Struct Biol Cryst Commun 63: 998

Released	2007-12-11
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	ALLOPHYCOCYANIN ALPHA CHAIN (protein) ALLOPHYCOCYANIN BETA CHAIN (protein)
Unique Ligands	CYC

Explore in 3D

2XB3 \| pdb_00002xb3	Download File View File

The Structure of Cyanobacterial PsbP

Michoux, F., Takasaka, K., Nixon, P., Murray, J.W.

(2010) Biochemistry 49: 7411

Released	2010-08-25
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	PSBP PROTEIN (protein)
Unique Ligands	ZN

Explore in 3D

2YBV \| pdb_00002ybv	Download File View File

STRUCTURE OF RUBISCO FROM THERMOSYNECHOCOCCUS ELONGATUS

Terlecka, B., Wilhelmi, V., Bialek, W., Gubernator, B., Szczepaniak, A., Hofmann, E.

To be published

Released	2012-03-28
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN (protein) RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL SUBUNIT (protein)
Unique Ligands	CL

Explore in 3D

3AZC \| pdb_00003azc	Download File View File

Crystal structure of the soluble part of cytochrome b6f complex iron-sulfur subunit from Thermosynechococcus elongatus BP-1

Veit, S., Takeda, K., Tsunoyama, Y., Roegner, M., Miki, K.

(2012) Acta Crystallogr D Biol Crystallogr 68: 1400-1408

Released	2012-05-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Cytochrome b6-f complex iron-sulfur subunit (protein)
Unique Ligands	FES

Explore in 3D

3H7V \| pdb_00003h7v	Download File View File

CRYSTAL STRUCTURE OF O-SUCCINYLBENZOATE SYNTHASE FROM THERMOSYNECHOCOCCUS ELONGATUS BP-1 complexed with MG in the active site

Fedorov, A.A., Fedorov, E.V., Sauder, J.M., Burley, S.K., Gerlt, J.A., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2014) Proc Natl Acad Sci U S A 111: 8535-8540

Released	2009-05-12
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	O-SUCCINYLBENZOATE SYNTHASE (protein)
Unique Ligands	MG

Explore in 3D

3HZE \| pdb_00003hze	Download File View File

Crystal Structure of Ycf54 protein from Thermosynechococcus elongatus, Northeast Structural Genomics Consortium Target TeR59

Kuzin, A., Abashidze, M., Seetharaman, J., Sahdev, S., Xiao, R., Ciccosanti, C., Lee, D., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2009-07-07
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Ycf54 protein (protein)
Unique Ligands	PO4

Explore in 3D

3KWC \| pdb_00003kwc	Download File View File

Oxidized, active structure of the beta-carboxysomal gamma-Carbonic Anhydrase, CcmM

Kimber, M.S., Castel, S.E., Pena, K.L.

(2010) Proc Natl Acad Sci U S A 107: 2455-2460

Released	2010-02-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Carbon dioxide concentrating mechanism protein (protein)
Unique Ligands	CL, IPA, ZN

Explore in 3D

3KWD \| pdb_00003kwd	Download File View File

Inactive truncation of the beta-carboxysomal gamma-Carbonic Anhydrase, CcmM, form 1

Pena, K.L., Kimber, M.S., Castel, S.E.

(2010) Proc Natl Acad Sci U S A 107: 2455-2460

Released	2010-02-23
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Thermosynechococcus vestitus BP-1
Macromolecule	Carbon dioxide concentrating mechanism protein (protein)
Unique Ligands	CL, ZN

1 to 25 of 192 Structures

Page 1 of 8

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1IZL | pdb_00001izl

1Q6A | pdb_00001q6a

1Q6B | pdb_00001q6b

1SUY | pdb_00001suy

1SV1 | pdb_00001sv1

1V2Z | pdb_00001v2z

1VGL | pdb_00001vgl

1X0G | pdb_00001x0g

1X0P | pdb_00001x0p

2AXT | pdb_00002axt

2C41 | pdb_00002c41

2L8V | pdb_00002l8v

2M7U | pdb_00002m7u

2M7V | pdb_00002m7v

2N5U | pdb_00002n5u

2RQ6 | pdb_00002rq6

2RQ7 | pdb_00002rq7

2V8A | pdb_00002v8a

2XB3 | pdb_00002xb3

2YBV | pdb_00002ybv

3AZC | pdb_00003azc

3H7V | pdb_00003h7v

3HZE | pdb_00003hze

3KWC | pdb_00003kwc

3KWD | pdb_00003kwd