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234,785 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Scientific Name of the Source Organism = "Thermoplasma acidophilum DSM 1728"

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Search Summary

This query matches 97 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (97)

Scientific Name of Source Organism

	Coxsackievirus B3 (97)
	Homo sapiens (1)

Taxonomy

	Riboviria (97)
	Eukaryota (1)

Experimental Method

	X-RAY DIFFRACTION (50)
	ELECTRON MICROSCOPY (46)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (94)
	RNA (3)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (24)
	2.0 - 2.5 (15)
	2.5 - 3.0 (25)
	3.0 - 3.5 (15)
	3.5 - 4.0 (15)

Release Date

	1995 - 1999 (4)
	2000 - 2004 (1)
	2005 - 2009 (6)
	2010 - 2014 (20)
	2015 - 2019 (15)
	2020 - 2024 (51)

Enzyme Classification Name

	Hydrolases (24)
	Transferases (6)

Membrane Protein Annotation

mpstruc (4)

Symmetry Type

	Icosahedral (54)
	Asymmetric (27)
	Cyclic (19)

SCOP Classification

	All beta proteins (25)
	Artifacts (16)
	Multi-domain proteins (alpha and beta) (14)

AllSelected

1 to 25 of 97 Polymer Entities

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1COV: Entity 1	Download File View File

COXSACKIEVIRUS B3 COAT PROTEIN

Muckelbauer, J.K., Rossmann, M.G.

(1995) Acta Crystallogr D Biol Crystallogr 51: 871-887

Released	1996-03-08
Method	X-RAY DIFFRACTION 3.5 Å
Chain ID	A [auth 1]
Organism	Coxsackievirus B3
Macromolecule	COXSACKIEVIRUS COAT PROTEIN

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1COV: Entity 2	Download File View File

COXSACKIEVIRUS B3 COAT PROTEIN

Muckelbauer, J.K., Rossmann, M.G.

(1995) Acta Crystallogr D Biol Crystallogr 51: 871-887

Released	1996-03-08
Method	X-RAY DIFFRACTION 3.5 Å
Chain ID	B [auth 2]
Organism	Coxsackievirus B3
Macromolecule	COXSACKIEVIRUS COAT PROTEIN

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1COV: Entity 3	Download File View File

COXSACKIEVIRUS B3 COAT PROTEIN

Muckelbauer, J.K., Rossmann, M.G.

(1995) Acta Crystallogr D Biol Crystallogr 51: 871-887

Released	1996-03-08
Method	X-RAY DIFFRACTION 3.5 Å
Chain ID	C [auth 3]
Organism	Coxsackievirus B3
Macromolecule	COXSACKIEVIRUS COAT PROTEIN

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1COV: Entity 4	Download File View File

COXSACKIEVIRUS B3 COAT PROTEIN

Muckelbauer, J.K., Rossmann, M.G.

(1995) Acta Crystallogr D Biol Crystallogr 51: 871-887

Released	1996-03-08
Method	X-RAY DIFFRACTION 3.5 Å
Chain ID	D [auth 4]
Organism	Coxsackievirus B3
Macromolecule	COXSACKIEVIRUS COAT PROTEIN

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1RFR: Entity 1	Download File View File

NMR structure of the 30mer stemloop-D of coxsackieviral RNA

Ohlenschlager, O., Wohnert, J., Bucci, E., Seitz, S., Hafner, S., Ramachandran, R., Zell, R., Gorlach, M.

(2004) Structure 12: 237-248

Released	2004-03-23
Method	SOLUTION NMR
Chain ID	A
Organism	Coxsackievirus B3
Macromolecule	stemloop-D RNA of the 5'-cloverleaf of coxsackievirus B3

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2ZTX: Entity 1	Download File View File

Complex structure of CVB3 3C protease with EPDTC

Lee, C.C., Wang, A.H.-J.

(2009) J Biological Chem 284: 7646-7655

Released	2009-01-13
Method	X-RAY DIFFRACTION 1.72 Å
Chain ID	A
Organism	Coxsackievirus B3
Macromolecule	3C proteinase

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2ZTY: Entity 1	Download File View File

crystal structure of 3C protease from CVB3 in space group C2

Lee, C.C., Wang, A.H.-J.

(2009) J Biological Chem 284: 7646-7655

Released	2009-01-13
Method	X-RAY DIFFRACTION 1.72 Å
Chain ID	A
Organism	Coxsackievirus B3
Macromolecule	3C proteinase

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2ZTZ: Entity 1	Download File View File

crystal structure of 3C protease from CVB3 in space group P21

Lee, C.C., Wang, A.H.-J.

(2009) J Biological Chem 284: 7646-7655

Released	2009-01-13
Method	X-RAY DIFFRACTION 2 Å
Chain IDs	A, B
Organism	Coxsackievirus B3
Macromolecule	3C proteinase

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2ZU1: Entity 1	Download File View File

crystal structure of CVB3 3C protease mutant C147A

Lee, C.C., Tsui, Y.C., Wang, A.H.-J.

(2009) J Biological Chem 284: 7646-7655

Released	2009-01-13
Method	X-RAY DIFFRACTION 1.38 Å
Chain IDs	B, A
Organism	Coxsackievirus B3
Macromolecule	3C proteinase

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2ZU3: Entity 1	Download File View File

Complex structure of CVB3 3C protease with TG-0204998

Lee, C.C., Tsui, Y.C., Wang, A.H.-J.

(2009) J Biological Chem 284: 7646-7655

Released	2009-01-13
Method	X-RAY DIFFRACTION 1.75 Å
Chain ID	A
Organism	Coxsackievirus B3
Macromolecule	3C proteinase

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3DDK: Entity 1	Download File View File

Coxsackievirus B3 3Dpol RNA Dependent RNA Polymerase

Campagnola, G., Weygandt, M.H., Scoggin, K.E., Peersen, O.B.

(2008) J Virol 82: 9458-9464

Released	2008-09-23
Method	X-RAY DIFFRACTION 2.25 Å
Chain ID	A
Organism	Coxsackievirus B3
Macromolecule	RNA polymerase B3 3Dpol

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3JD7: Entity 1	Download File View File

The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs

Lee, H., Shingler, K.L., Organtini, L.J., Ashley, R.E., Makhov, A.M., Conway, J.F., Hafenstein, S.

(2016) Sci Adv 2: e1501929-e1501929

Released	2016-09-14
Method	ELECTRON MICROSCOPY 3.9 Å
Chain ID	A [auth 1]
Organism	Coxsackievirus B3
Macromolecule	Capsid protein VP1

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3JD7: Entity 2	Download File View File

The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs

Lee, H., Shingler, K.L., Organtini, L.J., Ashley, R.E., Makhov, A.M., Conway, J.F., Hafenstein, S.

(2016) Sci Adv 2: e1501929-e1501929

Released	2016-09-14
Method	ELECTRON MICROSCOPY 3.9 Å
Chain ID	B [auth 2]
Organism	Coxsackievirus B3
Macromolecule	Capsid protein VP2

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3JD7: Entity 3	Download File View File

The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs

Lee, H., Shingler, K.L., Organtini, L.J., Ashley, R.E., Makhov, A.M., Conway, J.F., Hafenstein, S.

(2016) Sci Adv 2: e1501929-e1501929

Released	2016-09-14
Method	ELECTRON MICROSCOPY 3.9 Å
Chain ID	C [auth 3]
Organism	Coxsackievirus B3
Macromolecule	Capsid protein VP3

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3JD7: Entity 4	Download File View File

The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs

Lee, H., Shingler, K.L., Organtini, L.J., Ashley, R.E., Makhov, A.M., Conway, J.F., Hafenstein, S.

(2016) Sci Adv 2: e1501929-e1501929

Released	2016-09-14
Method	ELECTRON MICROSCOPY 3.9 Å
Chain ID	D [auth 4]
Organism	Coxsackievirus B3
Macromolecule	Capsid protein VP4

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3ZYD: Entity 1	Download File View File

Crystal structure of 3C protease of coxsackievirus B3

Tan, J., Anand, K., Mesters, J.R., Hilgenfeld, R.

To be published

Released	2012-08-29
Method	X-RAY DIFFRACTION 1.7 Å
Chain ID	A
Organism	Coxsackievirus B3
Macromolecule	3C PROTEINASE

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3ZYE: Entity 1	Download File View File

Crystal structure of 3C protease mutant (T68A) of coxsackievirus B3

Tan, J., Anand, K., Mesters, J.R., Hilgenfeld, R.

To be published

Released	2012-08-29
Method	X-RAY DIFFRACTION 1.85 Å
Chain ID	A
Organism	Coxsackievirus B3
Macromolecule	3C PROTEINASE

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3ZZ3: Entity 1	Download File View File

Crystal structure of 3C protease mutant (N126Y) of coxsackievirus B3

Tan, J., Anand, K., Mesters, J.R., Hilgenfeld, R.

To be published

Released	2012-09-19
Method	X-RAY DIFFRACTION 1.89 Å
Chain IDs	A, B
Organism	Coxsackievirus B3
Macromolecule	3C PROTEINASE

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3ZZ4: Entity 1	Download File View File

Crystal structure of 3C protease mutant (T68A and N126Y) of coxsackievirus B3

Tan, J., Anand, K., Mesters, J.R., Hilgenfeld, R.

To be published

Released	2012-09-19
Method	X-RAY DIFFRACTION 2.1 Å
Chain IDs	A, B
Organism	Coxsackievirus B3
Macromolecule	3C PROTEINASE

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3ZZ5: Entity 1	Download File View File

Crystal structure of 3C protease of coxsackievirus B3 complexed with alpha, beta-unsaturated ethyl ester inhibitor 74

Tan, J., Anand, K., Mesters, J.R., Hilgenfeld, R.

To be published

Released	2012-09-19
Method	X-RAY DIFFRACTION 2.2 Å
Chain ID	A
Organism	Coxsackievirus B3
Macromolecule	3C PROTEINASE

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3ZZ6: Entity 1	Download File View File

Crystal structure of 3C protease of coxsackievirus B3 complexed with Michael receptor inhibitor 75

Tan, J., Anand, K., Mesters, J.R., Hilgenfeld, R.

To be published

Released	2012-09-19
Method	X-RAY DIFFRACTION 2.05 Å
Chain ID	A
Organism	Coxsackievirus B3
Macromolecule	POLYPROTEIN 3BCD

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3ZZ7: Entity 1	Download File View File

Crystal structure of 3C protease of coxsackievirus B3 complexed with alpha, beta-unsaturated ethyl ester inhibitor 81

Tan, J., Anand, K., Mesters, J.R., Hilgenfeld, R.

To be published

Released	2012-09-19
Method	X-RAY DIFFRACTION 1.8 Å
Chain ID	A
Organism	Coxsackievirus B3
Macromolecule	3C PROTEINASE

Explore in 3D

3ZZ8: Entity 1	Download File View File

Crystal structure of 3C protease of coxsackievirus B3 complexed with alpha, beta-unsaturated ethyl ester inhibitor 82

Tan, J., Anand, K., Mesters, J.R., Hilgenfeld, R.

To be published

Released	2012-09-19
Method	X-RAY DIFFRACTION 1.85 Å
Chain ID	A
Organism	Coxsackievirus B3
Macromolecule	3C PROTEINASE

Explore in 3D

3ZZ9: Entity 1	Download File View File

Crystal structure of 3C protease of coxsackievirus B3 complexed with alpha, beta-unsaturated ethyl ester inhibitor 83

Tan, J., Anand, K., Mesters, J.R., Hilgenfeld, R.

To be published

Released	2012-09-19
Method	X-RAY DIFFRACTION 1.9 Å
Chain ID	A
Organism	Coxsackievirus B3
Macromolecule	3C PROTEINASE

Explore in 3D

3ZZA: Entity 1	Download File View File

Crystal structure of 3C protease of coxsackievirus B3 complexed with alpha, beta-unsaturated ethyl ester inhibitor 84

Tan, J., Anand, K., Mesters, J.R., Hilgenfeld, R.

To be published

Released	2012-09-19
Method	X-RAY DIFFRACTION 1.8 Å
Chain ID	A
Organism	Coxsackievirus B3
Macromolecule	3C PROTEINASE

1 to 25 of 97 Polymer Entities

Page 1 of 4

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification