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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Chemical ID(s) = AMP

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Search Summary

This query matches 4 Structures.

Refinements

Structure Determination Methodology

experimental (4)

Scientific Name of Source Organism

	Homo sapiens (2)
	Chromobacterium violaceum ATCC 12472 (1)
	Xanthomonas campestris pv. campestris (1)

Taxonomy

	Bacteria (2)
	Eukaryota (2)

Experimental Method

X-RAY DIFFRACTION (4)

Polymer Entity Type

Protein (4)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.5 - 3.0 (1)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (1)
	2015 - 2019 (1)
	2020 - 2024 (1)

Enzyme Classification Name

	Lyases (1)
	Oxidoreductases (2)
	Transferases (1)

Symmetry Type

	Cyclic (2)
	Asymmetric (1)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (1)
	All alpha proteins (1)

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1 to 4 of 4 Structures

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2NW9 \| pdb_00002nw9	Download File View File

Crystal Structure of Tryptophan 2,3-dioxygenase (TDO) from Xanthomonas campestris in complex with ferrous heme and 6-fluoro-tryptophan. Northeast Structural Genomics Target XcR13

Forouhar, F., Anderson, J.L.R., Mowat, C.G., Bruckmann, C., Thackray, S.J., Seetharaman, J., Ho, C.K., Ma, L.C., Cunningham, K., Janjua, H., Zhao, L., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Champman, S.K., Tong, L., Northeast Structural Genomics Consortium (NESG)

(2007) Proc Natl Acad Sci U S A 104: 473-478

Released	2006-12-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Xanthomonas campestris pv. campestris
Macromolecule	Tryptophan 2,3-dioxygenase (protein)
Unique Ligands	FT6, HEM, MN

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4EAR \| pdb_00004ear	Download File View File

Crystal structure of purine nucleoside phosphorylase (W16Y, W94Y, W178Y, H257W) mutant from human complexed with DADMe-ImmG and phosphate

Haapalainen, A.M., Ho, M.C., Suarez, J.J., Almo, S.C., Schramm, V.L.

(2013) Chem Biol 20: 212-222

Released	2013-02-06
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Purine nucleoside phosphorylase (protein)
Unique Ligands	IM5, PO4

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6FW9 \| pdb_00006fw9	Download File View File

Crystal structure of L-tryptophan oxidase VioA from Chromobacterium violaceum in complex with 6-Fluoro-L-Tryptophan

Lai, H.E., Morgan, M., Moore, S., Freemont, P.

(2019) bioRxiv

Released	2019-02-13
Method	X-RAY DIFFRACTION 2.739 Å
Organisms	Chromobacterium violaceum ATCC 12472
Macromolecule	Flavin-dependent L-tryptophan oxidase VioA (protein)
Unique Ligands	FAD, FT6, MG