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234,785 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Zlotnick, A."

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Search Summary

This query matches 60 Structures.

Refinements

Structure Determination Methodology

experimental (60)

Scientific Name of Source Organism

	Niallia circulans (24)
	Limosilactobacillus reuteri (13)
	Geobacillus thermoleovorans (4)
	Thermoanaerobacterium thermosulfurigenes (4)
	Thermus thermophilus (4)
	Bacteroides thetaiotaomicron VPI-5482 (3)
	Lactobacillus johnsonii (3)
	Rhodococcus jostii RHA1 (3)
	Aquifex aeolicus (1)
	Geobacillus (1)

Taxonomy

Bacteria (60)

Experimental Method

X-RAY DIFFRACTION (60)

Polymer Entity Type

Protein (60)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (16)
	2.0 - 2.5 (28)
	2.5 - 3.0 (14)
	3.5 - 4.0 (1)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (16)
	2000 - 2004 (9)
	2005 - 2009 (6)
	2010 - 2014 (11)
	2015 - 2019 (11)
	2020 - 2024 (6)

Enzyme Classification Name

	Transferases (50)
	Hydrolases (6)
	Oxidoreductases (3)

Symmetry Type

	Asymmetric (53)
	Cyclic (10)
	Dihedral (1)

SCOP Classification

	All beta proteins (32)
	Alpha and beta proteins (a/b) (33)
	Artifacts (3)
	All alpha proteins (1)

AllSelected

1 to 25 of 60 Structures

Page 1 of 3

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1A47 \| pdb_00001a47	Download File View File

CGTASE FROM THERMOANAEROBACTERIUM THERMOSULFURIGENES EM1 IN COMPLEX WITH A MALTOHEXAOSE INHIBITOR

Uitdehaag, J.C.M., Kalk, K.H., Rozeboom, H.J., Dijkstra, B.W.

(1998) J Biological Chem 273: 5771-5779

Released	1998-06-17
Method	X-RAY DIFFRACTION 2.56 Å
Organisms	Thermoanaerobacterium thermosulfurigenes
Macromolecule	CYCLODEXTRIN GLYCOSYLTRANSFERASE (protein)
Unique Ligands	ADH, CA
Unique branched monosaccharides	G6D, GLC

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1CDG \| pdb_00001cdg	Download File View File

NUCLEOTIDE SEQUENCE AND X-RAY STRUCTURE OF CYCLODEXTRIN GLYCOSYLTRANSFERASE FROM BACILLUS CIRCULANS STRAIN 251 IN A MALTOSE-DEPENDENT CRYSTAL FORM

Lawson, C.L., Van Montfort, R., Strokopytov, B.V., Kalk, K.H., Rozeboom, H.J., Dijkstra, B.W.

(1994) J Mol Biology 236: 590-600

Released	1994-01-31
Method	X-RAY DIFFRACTION 2 Å
Organisms	Niallia circulans
Macromolecule	CYCLODEXTRIN GLYCOSYL-TRANSFERASE (protein)
Unique Ligands	CA
Unique branched monosaccharides	GLC

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1CGV \| pdb_00001cgv	Download File View File

SITE DIRECTED MUTATIONS OF THE ACTIVE SITE RESIDUE TYROSINE 195 OF CYCLODEXTRIN GLYCOSYLTRANSFERASE FROM BACILLUS CIRCULANS STRAIN 251 AFFECTING ACTIVITY AND PRODUCT SPECIFICITY

Strokopytov, B.V., Dijkstra, B.W.

(1995) Biochemistry 34: 3368-3376

Released	1995-02-27
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Niallia circulans
Macromolecule	CYCLOMALTODEXTRIN GLUCANOTRANSFERASE (protein)
Unique Ligands	CA
Unique branched monosaccharides	GLC

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1CGW \| pdb_00001cgw	Download File View File

SITE DIRECTED MUTATIONS OF THE ACTIVE SITE RESIDUE TYROSINE 195 OF CYCLODEXTRIN GLYCOSYLTRANSFERASE FROM BACILLUS CIRCULANS STRAIN 251 AFFECTING ACTIVITY AND PRODUCT SPECIFICITY

Strokopytov, B.V., Dijkstra, B.W.

(1995) Biochemistry 34: 3368-3376

Released	1995-02-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Niallia circulans
Macromolecule	CYCLOMALTODEXTRIN GLUCANOTRANSFERASE (protein)
Unique Ligands	CA
Unique branched monosaccharides	GLC

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1CGX \| pdb_00001cgx	Download File View File

SITE DIRECTED MUTATIONS OF THE ACTIVE SITE RESIDUE TYROSINE 195 OF CYCLODEXTRIN GLYXOSYLTRANSFERASE FROM BACILLUS CIRCULANS STRAIN 251 AFFECTING ACTIVITY AND PRODUCT SPECIFICITY

Strokopytov, B.V., Dijkstra, B.W.

(1995) Biochemistry 34: 3368-3376

Released	1995-02-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Niallia circulans
Macromolecule	CYCLOMALTODEXTRIN GLUCANOTRANSFERASE (protein)
Unique Ligands	CA
Unique branched monosaccharides	GLC

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1CGY \| pdb_00001cgy	Download File View File

SITE DIRECTED MUTATIONS OF THE ACTIVE SITE RESIDUE TYROSINE 195 OF CYCLODEXTRIN GLYXOSYLTRANSFERASE FROM BACILLUS CIRCULANS STRAIN 251 AFFECTING ACTIVITY AND PRODUCT SPECIFICITY

Strokopytov, B.V., Dijkstra, B.W.

(1995) Biochemistry 34: 3368-3376

Released	1995-02-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Niallia circulans
Macromolecule	CYCLOMALTODEXTRIN GLUCANOTRANSFERASE (protein)
Unique Ligands	CA
Unique branched monosaccharides	GLC

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1CIU \| pdb_00001ciu	Download File View File

THERMOSTABLE CGTASE FROM THERMOANAEROBACTERIUM THERMOSULFURIGENES EM1 AT PH 8.0.

Knegtel, R.M.A., Dijkstra, B.W.

(1996) J Mol Biology 256: 611-622

Released	1996-03-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thermoanaerobacterium thermosulfurigenes
Macromolecule	CYCLODEXTRIN GLYCOSYLTRANSFERASE (protein)
Unique Ligands	CA

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1CXE \| pdb_00001cxe	Download File View File

COMPLEX OF CGTASE WITH MALTOTETRAOSE AT ROOM TEMPERATURE AND PH 9.1 BASED ON DIFFRACTION DATA OF A CRYSTAL SOAKED WITH ALPHA-CYCLODEXTRIN

Knegtel, R.M.A., Strokopytov, B.V., Dijkstra, B.W.

(1995) J Biological Chem 270: 29256-29264

Released	1995-12-15
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Niallia circulans
Macromolecule	CYCLODEXTRIN GLYCOSYLTRANSFERASE (protein)
Unique Ligands	CA
Unique branched monosaccharides	GLC

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1CXF \| pdb_00001cxf	Download File View File

COMPLEX OF A (D229N/E257Q) DOUBLE MUTANT CGTASE FROM BACILLUS CIRCULANS STRAIN 251 WITH MALTOTETRAOSE AT 120 K AND PH 9.1 OBTAINED AFTER SOAKING THE CRYSTAL WITH ALPHA-CYCLODEXTRIN

Knegtel, R.M.A., Strokopytov, B.V., Dijkstra, B.W.

(1995) J Biological Chem 270: 29256-29264

Released	1995-12-15
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Niallia circulans
Macromolecule	CYCLODEXTRIN GLYCOSYLTRANSFERASE (protein)
Unique Ligands	CA
Unique branched monosaccharides	GLC

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1CXH \| pdb_00001cxh	Download File View File

COMPLEX OF CGTASE WITH MALTOTETRAOSE AT ROOM TEMPERATURE AND PH 9.6 BASED ON DIFFRACTION DATA OF A CRYSTAL SOAKED WITH MALTOHEPTAOSE

Knegtel, R.M.A., Strokopytov, B.V., Dijkstra, B.W.

(1995) J Biological Chem 270: 29256-29264

Released	1995-12-15
Method	X-RAY DIFFRACTION 2.41 Å
Organisms	Niallia circulans
Macromolecule	CYCLODEXTRIN GLYCOSYLTRANSFERASE (protein)
Unique Ligands	CA
Unique branched monosaccharides	GLC

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1CXI \| pdb_00001cxi	Download File View File

WILD-TYPE CGTASE FROM BACILLUS CIRCULANS STRAIN 251 AT 120 K AND PH 7.55

Knegtel, R.M.A., Strokopytov, B.V., Dijkstra, B.W.

(1995) J Biological Chem 270: 29256-29264

Released	1995-12-15
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Niallia circulans
Macromolecule	CYCLODEXTRIN GLYCOSYLTRANSFERASE (protein)
Unique Ligands	CA
Unique branched monosaccharides	GLC

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1CXK \| pdb_00001cxk	Download File View File

COMPLEX BETWEEN A MALTONONAOSE SUBSTRATE AND BACILLUS CIRCULANS STRAIN 251 CGTASE E257Q/D229N

Uitdehaag, J.C.M., Kalk, K.H., Dijkstra, B.W.

(1999) Nat Struct Biol 6: 432-436

Released	1999-05-03
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Niallia circulans
Macromolecule	PROTEIN (CYCLODEXTRIN-GLYCOSYLTRANSFERASE) (protein)
Unique Ligands	CA
Unique branched monosaccharides	GLC

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1CXL \| pdb_00001cxl	Download File View File

COMPLEX BETWEEN A COVALENT INTERMEDIATE AND BACILLUS CIRCULANS STRAIN 251 CGTASE E257Q

Uitdehaag, J.C.M., Dijkstra, B.W.

(1999) Nat Struct Biol 6: 432-436

Released	1999-05-03
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Niallia circulans
Macromolecule	PROTEIN (CYCLODEXTRIN-GLYCOSYLTRANSFERASE) (protein)
Unique Ligands	CA, MPD
Unique branched monosaccharides	G4D, GLC, GLF

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1D3C \| pdb_00001d3c	Download File View File

MICHAELIS COMPLEX OF BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYLTRANSFERASE WITH GAMMA-CYCLODEXTRIN

Uitdehaag, J.C.M., Kalk, K.H., van der Veen, B.A., Dijkhuizen, L., Dijkstra, B.W.

(1999) J Biological Chem 274: 34868-34876

Released	1999-12-22
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Niallia circulans
Macromolecule	CYCLODEXTRIN GLYCOSYLTRANSFERASE (protein)
Unique Ligands	CA, MPD
Unique branched monosaccharides	GLC

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1DTU \| pdb_00001dtu	Download File View File

BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYLTRANSFERASE: A MUTANT Y89D/S146P COMPLEXED TO AN HEXASACCHARIDE INHIBITOR

Uitdehaag, J.C.M., Kalk, K.H., Dijkstra, B.W.

(2000) J Mol Biology 296: 1027-1038

Released	2000-03-06
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Niallia circulans
Macromolecule	PROTEIN (CYCLODEXTRIN GLYCOSYLTRANSFERASE) (protein)
Unique Ligands	ADH, CA
Unique branched monosaccharides	BGC, G6D, GLC

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1EO5 \| pdb_00001eo5	Download File View File

Bacillus circulans strain 251 cyclodextrin glycosyltransferase in complex with maltoheptaose

Uitdehaag, J.C.M., Dijkstra, B.W.

(2000) Biochemistry 39: 7772-7780

Released	2000-11-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Niallia circulans
Macromolecule	PROTEIN (CYCLODEXTRIN GLYCOSYLTRANSFERASE) (protein)
Unique Ligands	CA, MPD
Unique branched monosaccharides	BGC, GLC

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1EO7 \| pdb_00001eo7	Download File View File

BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYLTRANSFERASE IN COMPLEX WITH MALTOHEXAOSE

Uitdehaag, J.C.M., Dijkstra, B.W.

(2000) Biochemistry 39: 7772-7780

Released	2000-11-22
Method	X-RAY DIFFRACTION 2.48 Å
Organisms	Niallia circulans
Macromolecule	PROTEIN (CYCLODEXTRIN GLYCOSYLTRANSFERASE) (protein)
Unique Ligands	CA
Unique branched monosaccharides	GLC

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1KCK \| pdb_00001kck	Download File View File

Bacillus circulans strain 251 Cyclodextrin glycosyl transferase mutant N193G

Rozeboom, H.J., Uitdehaag, J.C.M., Dijkstra, B.W.

(2002) J Biological Chem 277: 1113-1119

Released	2002-01-16
Method	X-RAY DIFFRACTION 2.43 Å
Organisms	Niallia circulans
Macromolecule	CYCLODEXTRIN GLYCOSYLTRANSFERASE (protein)
Unique Ligands	ADH, CA, GLC
Unique branched monosaccharides	BGC, G6D, GLC

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1KCL \| pdb_00001kcl	Download File View File

Bacillus ciruclans strain 251 Cyclodextrin glycosyl transferase mutant G179L

Rozeboom, H.J., Uitdehaag, J.C.M., Dijkstra, B.W.

(2002) J Biological Chem 277: 1113-1119

Released	2002-01-16
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Niallia circulans
Macromolecule	Cyclodextrin glycosyltransferase (protein)
Unique Ligands	CA, GLC, MPD
Unique branched monosaccharides	BGC, GLC

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1OT1 \| pdb_00001ot1	Download File View File

Bacillus circulans strain 251 Cyclodextrin glycosyl transferase mutant D135A

Rozeboom, H.J., Dijkstra, B.W.

(2003) FEBS Lett 541: 47-51

Released	2003-06-03
Method	X-RAY DIFFRACTION 2 Å
Organisms	Niallia circulans
Macromolecule	Cyclomaltodextrin glucanotransferase (protein)
Unique Ligands	ACY, CA, EPE, MPD
Unique branched monosaccharides	BGC, GLC

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1OT2 \| pdb_00001ot2	Download File View File

Bacillus circulans strain 251 Cyclodextrin glycosyl transferase mutant D135N

Rozeboom, H.J., Dijkstra, B.W.

(2003) FEBS Lett 541: 47-51

Released	2003-06-03
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Niallia circulans
Macromolecule	Cyclomaltodextrin glucanotransferase (protein)
Unique Ligands	ACY, CA, EPE, GLC, MPD
Unique branched monosaccharides	BGC, GLC

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1PEZ \| pdb_00001pez	Download File View File

Bacillus circulans strain 251 mutant A230V

Rozeboom, H.J., Dijkstra, B.W.

(2003) Biochemistry 42: 7518-7526

Released	2003-10-28
Method	X-RAY DIFFRACTION 2.32 Å
Organisms	Niallia circulans
Macromolecule	Cyclomaltodextrin glucanotransferase (protein)
Unique Ligands	ACY, CA, EPE, MPD
Unique branched monosaccharides	BGC, GLC

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1PJ9 \| pdb_00001pj9	Download File View File

Bacillus circulans strain 251 loop mutant 183-195

Rozeboom, H.J., Dijkstra, B.W.

(2004) Proteins 54: 128-134

Released	2004-02-03
Method	X-RAY DIFFRACTION 2 Å
Organisms	Niallia circulans
Macromolecule	Cyclomaltodextrin glucanotransferase (protein)
Unique Ligands	ACY, CA, GLC, MPD
Unique branched monosaccharides	GLC