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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Li, S."

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Search Summary

This query matches 8 Structures.

Refinements

Structure Determination Methodology

experimental (8)

Scientific Name of Source Organism

	Klebsiella pneumoniae (3)
	Chromobacterium haemolyticum (2)
	Salmonella enterica (2)
	uncultured bacterium BLR12 (1)

Taxonomy

Bacteria (8)

Experimental Method

X-RAY DIFFRACTION (8)

Polymer Entity Type

Protein (8)

Refinement Resolution (Å)

	1.0 - 1.5 (7)
	2.0 - 2.5 (1)

Release Date

	2010 - 2014 (1)
	2015 - 2019 (3)
	2020 - 2024 (4)

Enzyme Classification Name

Hydrolases (8)

Symmetry Type

Asymmetric (8)

SCOP Classification

	Multi-domain proteins (alpha and beta) (3)
	Alpha and beta proteins (a+b) (1)

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1 to 8 of 8 Structures

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3ZNY \| pdb_00003zny	Download File View File

Crystal structure of the class A extended-spectrum beta-lactamase CTX- M-96, a natural D240G mutant derived from CTX-M-12

Power, P., Herman, R., Bouillenne, F., Ghiglione, B., Rodriguez, M.M., Galleni, M., Gutkind, G., Charlier, P., Sauvage, E.

(2015) Biochemistry 54: 5072

Released	2014-01-08
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Klebsiella pneumoniae
Macromolecule	CTX-M-12A ENZYME (protein)

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5AEB \| pdb_00005aeb	Download File View File

Crystal structure of the class B3 di-zinc metallo-beta-lactamase LRA- 12 from an Alaskan soil metagenome.

Power, P., Herman, R., Kerff, F., Bouillenne, F., Rodriguez, M.M., Galleni, M., Handelsman, J., Gutkind, G., Charlier, P., Sauvage, E.

(2017) PLoS One 12: e0182043-e0182043

Released	2015-09-16
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	uncultured bacterium BLR12
Macromolecule	LRA-12 (protein)
Unique Ligands	CO, SO4, ZN

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6BN3 \| pdb_00006bn3	Download File View File

CTX-M-151 class A extended-spectrum beta-lactamase apo crystal structure at 1.3 Angstrom resolution

Power, P., Ghiglione, B., Rodriguez, M.M., Gutkind, G., Ishii, Y., Bonomo, R.A., Klinke, S.

(2021) Antimicrob Agents Chemother 65:

Released	2018-11-21
Method	X-RAY DIFFRACTION 1.278 Å
Organisms	Salmonella enterica
Macromolecule	Beta-lactamase (protein)
Unique Ligands	EPE

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6BPF \| pdb_00006bpf	Download File View File

CTX-M-151 class A extended-spectrum beta-lactamase crystal structure in complex with avibactam at 1.32 Angstrom resolution

Power, P., Ghiglione, B., Rodriguez, M.M., Gutkind, G., Ishii, Y., Bonomo, R.A., Klinke, S.

(2021) Antimicrob Agents Chemother 65:

Released	2018-11-28
Method	X-RAY DIFFRACTION 1.318 Å
Organisms	Salmonella enterica
Macromolecule	Beta-lactamase (protein)
Unique Ligands	NXL

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7UTB \| pdb_00007utb	Download File View File

KPC-2 CARBAPENEMASE IN COMPLEX WITH THE BORONIC ACID INHIBITOR MB_076

van den Akker, F., Alsenani, T.A.

(2023) Antimicrob Agents Chemother 67: e0093022-e0093022

Released	2022-12-14
Method	X-RAY DIFFRACTION 1.38 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Carbapenem-hydrolyzing beta-lactamase KPC (protein)
Unique Ligands	OC0

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8EHH \| pdb_00008ehh	Download File View File

Crystal structure of the class A extended-spectrum beta-lactamase CTX-M-96 in complex with relebactam at 1.03 Angstrom resolution

Power, P., Ghiglione, B., Bonomo, R.A., Rodriguez, M.M., Gutkind, G., Klinke, S.

(2024) Antimicrob Agents Chemother 68: e0172123-e0172123

Released	2023-09-20
Method	X-RAY DIFFRACTION 1.03 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	MK7

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8EHU \| pdb_00008ehu	Download File View File

Crystal structure of the environmental CRH-1 class A carbapenemase at 1.1 Angstrom resolution

Power, P., Brunetti, F., Ghiglione, B., Guardabassi, L., Gutkind, G., Klinke, S.

(2023) Antimicrob Agents Chemother 67: e0006123-e0006123

Released	2023-05-31
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Chromobacterium haemolyticum
Macromolecule	Beta-lactamase (protein)

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8EK9 \| pdb_00008ek9	Download File View File

Crystal structure of the class A carbapenemase CRH-1 in complex with avibactam at 1.4 Angstrom resolution

Power, P., Brunetti, F., Ghiglione, B., Guardabassi, L., Gutkind, G., Klinke, S.

(2023) Antimicrob Agents Chemother 67: e0006123-e0006123

Released	2023-05-31
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Chromobacterium haemolyticum
Macromolecule	Beta-lactamase (protein)
Unique Ligands	NXL

1 to 8 of 8 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3ZNY | pdb_00003zny

Crystal structure of the class A extended-spectrum beta-lactamase CTX- M-96, a natural D240G mutant derived from CTX-M-12

5AEB | pdb_00005aeb

Crystal structure of the class B3 di-zinc metallo-beta-lactamase LRA- 12 from an Alaskan soil metagenome.

6BN3 | pdb_00006bn3

CTX-M-151 class A extended-spectrum beta-lactamase apo crystal structure at 1.3 Angstrom resolution

6BPF | pdb_00006bpf

CTX-M-151 class A extended-spectrum beta-lactamase crystal structure in complex with avibactam at 1.32 Angstrom resolution

7UTB | pdb_00007utb

KPC-2 CARBAPENEMASE IN COMPLEX WITH THE BORONIC ACID INHIBITOR MB_076

8EHH | pdb_00008ehh

Crystal structure of the class A extended-spectrum beta-lactamase CTX-M-96 in complex with relebactam at 1.03 Angstrom resolution

8EHU | pdb_00008ehu

Crystal structure of the environmental CRH-1 class A carbapenemase at 1.1 Angstrom resolution

8EK9 | pdb_00008ek9

Crystal structure of the class A carbapenemase CRH-1 in complex with avibactam at 1.4 Angstrom resolution

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3ZNY | pdb_00003zny

5AEB | pdb_00005aeb

6BN3 | pdb_00006bn3

6BPF | pdb_00006bpf

7UTB | pdb_00007utb

8EHH | pdb_00008ehh

8EHU | pdb_00008ehu

8EK9 | pdb_00008ek9