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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Huang, L."

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Search Summary

This query matches 430 Structures.

Refinements

Structure Determination Methodology

experimental (430)

Scientific Name of Source Organism

	Homo sapiens (177)
	Gallus gallus (17)
	Caldanaerobacter subterraneus subsp. tengcongensis (13)
	synthetic construct (12)
	Haloarcula marismortui (11)
	Saccharolobus solfataricus P2 (11)
	Gloeobacter violaceus (10)
	Candidatus Koribacter versatilis Ellin345 (9)
	Lachnospiraceae bacterium ND2006 (8)
	Roseobacter sp. (7)

More...

Taxonomy

	Eukaryota (233)
	Bacteria (114)
	Archaea (38)
	Duplodnaviria (12)
	other sequences (12)
	Riboviria (11)
	Viruses incertae sedis (3)
	Monodnaviria (2)
	Varidnaviria (2)

Experimental Method

	X-RAY DIFFRACTION (373)
	ELECTRON MICROSCOPY (47)
	SOLUTION NMR (10)

Polymer Entity Type

	Protein (314)
	RNA (155)
	DNA (31)

Refinement Resolution (Å)

	1.0 - 1.5 (20)
	1.5 - 2.0 (105)
	2.0 - 2.5 (118)
	2.5 - 3.0 (87)
	3.0 - 3.5 (52)
	3.5 - 4.0 (26)
	4.0 - 4.5 (6)
	> 4.5 (6)

Release Date

	1995 - 1999 (8)
	2000 - 2004 (12)
	2005 - 2009 (39)
	2010 - 2014 (48)
	2015 - 2019 (88)
	2020 - 2024 (116)
	2025 - 2029 (119)

Enzyme Classification Name

	Hydrolases (150)
	Oxidoreductases (24)
	Transferases (27)
	Translocases (13)
	Isomerases (8)
	Ligases (4)
	Lyases (6)

Membrane Protein Annotation

	PDBTM (17)
	MemProtMD (16)
	OPM (6)
	mpstruc (2)

Symmetry Type

	Asymmetric (255)
	Cyclic (55)
	Dihedral (6)
	Icosahedral (2)
	Helical (1)

SCOP Classification

	Membrane and cell surface proteins and peptides (14)
	Alpha and beta proteins (a+b) (35)
	All alpha proteins (29)
	All beta proteins (19)
	Alpha and beta proteins (a/b) (11)
	Artifacts (7)
	Small proteins (1)

AllSelected

1 to 25 of 430 Structures

Page 1 of 18

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1BCC \| pdb_00001bcc	Download File View File

CYTOCHROME BC1 COMPLEX FROM CHICKEN

Zhang, Z., Huang, L., Shulmeister, V.M., Chi, Y.-I., Kim, K.K., Hung, L.-W., Crofts, A.R., Berry, E.A., Kim, S.-H.

(1998) Nature 392: 677-684

Released	1998-08-19
Method	X-RAY DIFFRACTION 3.16 Å
Organisms	Gallus gallus
Macromolecule	Unique protein chains: 10
Unique Ligands	BOG, FES, HEM, PEE, U10

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1C4Z \| pdb_00001c4z	Download File View File

STRUCTURE OF AN E6AP-UBCH7 COMPLEX: INSIGHTS INTO THE UBIQUITINATION PATHWAY

Huang, L., Kinnucan, E., Wang, G., Beaudenon, S., Howley, P.M., Huibregtse, J.M., Pavletich, N.P.

(1999) Science 286: 1321-1326

Released	1999-11-17
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	UBIQUITIN CONJUGATING ENZYME E2 (protein) UBIQUITIN-PROTEIN LIGASE E3A (protein)

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1D5F \| pdb_00001d5f	Download File View File

STRUCTURE OF E6AP: INSIGHTS INTO UBIQUITINATION PATHWAY

Huang, L., Kinnucan, E., Wang, G., Beaudenon, S., Howley, P.M., Huibregtse, J.M., Pavletich, N.P.

(1999) Science 286: 1321-1326

Released	1999-11-17
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	E6AP HECT CATALYTIC DOMAIN, E3 LIGASE (protein)

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1DJ0 \| pdb_00001dj0	Download File View File

THE CRYSTAL STRUCTURE OF E. COLI PSEUDOURIDINE SYNTHASE I AT 1.5 ANGSTROM RESOLUTION

Foster, P.G., Huang, L., Santi, D.V., Stroud, R.M.

(2000) Nat Struct Biol 7: 23-27

Released	2000-05-31
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Escherichia coli
Macromolecule	PSEUDOURIDINE SYNTHASE I (protein)
Unique Ligands	CL

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1DUS \| pdb_00001dus	Download File View File

MJ0882-A hypothetical protein from M. jannaschii

Hung, L., Huang, L., Kim, R., Kim, S.H., Berkeley Structural Genomics Center (BSGC)

(2002) J Struct Funct Genomics 2: 121-127

Released	2000-07-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	MJ0882 (protein)

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1F4V \| pdb_00001f4v	Download File View File

CRYSTAL STRUCTURE OF ACTIVATED CHEY BOUND TO THE N-TERMINUS OF FLIM

Lee, S.Y., Cho, H.S., Pelton, J.G., Yan, D., Henderson, R.K., King, D., Huang, L.S., Kustu, S., Berry, E.A., Wemmer, D.E.

(2001) Nat Struct Biol 8: 52-56

Released	2001-01-17
Method	X-RAY DIFFRACTION 2.22 Å
Organisms	Escherichia coli
Macromolecule	CHEMOTAXIS CHEY PROTEIN (protein) FLAGELLAR MOTOR SWITCH PROTEIN (protein)
Unique Ligands	BEF, GOL, MG

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1J56 \| pdb_00001j56	Download File View File

MINIMIZED AVERAGE STRUCTURE OF BERYLLOFLUORIDE-ACTIVATED NTRC RECEIVER DOMAIN: MODEL STRUCTURE INCORPORATING ACTIVE SITE CONTACTS

Hastings, C.A., Lee, S.-Y., Cho, H.S., Yan, D., Kustu, S., Wemmer, D.E.

(2003) Biochemistry 42: 9081-9090

Released	2003-08-19
Method	SOLUTION NMR
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	NITROGEN REGULATION PROTEIN NR(I) (protein)
Unique Ligands	BEF

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1KRW \| pdb_00001krw	Download File View File

SOLUTION STRUCTURE AND BACKBONE DYNAMICS OF BERYLLOFLUORIDE-ACTIVATED NTRC RECEIVER DOMAIN

Hastings, C.A., Lee, S.-Y., Cho, H.S., Yan, D., Kustu, S., Wemmer, D.E.

(2003) Biochemistry 42: 9081-9090

Released	2003-08-19
Method	SOLUTION NMR
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	NITROGEN REGULATION PROTEIN NR(I) (protein)

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1KRX \| pdb_00001krx	Download File View File

SOLUTION STRUCTURE OF BERYLLOFLUORIDE-ACTIVATED NTRC RECEIVER DOMAIN: MODEL STRUCTURES INCORPORATING ACTIVE SITE CONTACTS

Hastings, C.A., Lee, S.-Y., Cho, H.S., Yan, D., Kustu, S., Wemmer, D.E.

(2003) Biochemistry 42: 9081-9090

Released	2003-08-19
Method	SOLUTION NMR
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	NITROGEN REGULATION PROTEIN NR(I) (protein)
Unique Ligands	BEF

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1LFD \| pdb_00001lfd	Download File View File

CRYSTAL STRUCTURE OF THE ACTIVE RAS PROTEIN COMPLEXED WITH THE RAS-INTERACTING DOMAIN OF RALGDS

Huang, L., Hofer, F., Martin, G.S., Kim, S.-H.

(1998) Nat Struct Biol 5: 422-426

Released	1999-05-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	RALGDS (protein) RAS (protein)
Unique Ligands	GNP, MG

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1LXD \| pdb_00001lxd	Download File View File

CRYSTAL STRUCTURE OF THE RAS INTERACTING DOMAIN OF RALGDS, A GUANINE NUCLEOTIDE DISSOCIATION STIMULATOR OF RAL PROTEIN

Huang, L., Weng, X.W., Hofer, F., Martin, G.S., Kim, S.H.

(1997) Nat Struct Biol 4: 609-615

Released	1998-03-11
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Rattus norvegicus
Macromolecule	RALGDSB (protein)

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1ME3 \| pdb_00001me3	Download File View File

High Resolution Crystal Structure Analysis Of Cruzain non-covalently Bound To A Hydroxymethyl Ketone Inhibitor (II)

Brinen, L.S., Huang, L., Ellman, J.A.

(2003) Bioorg Med Chem 11: 21-29

Released	2002-12-18
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Trypanosoma cruzi
Macromolecule	Cruzipain (protein)
Unique Ligands	P10

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1ME4 \| pdb_00001me4	Download File View File

High Resolution Crystal Structure Analysis Of Cruzain non-covalently Bound To A Hydroxymethyl Ketone Inhibitor (I)

Brinen, L.S., Huang, L., Ellman, J.A.

(2003) Bioorg Med Chem 11: 21-29

Released	2002-12-18
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Trypanosoma cruzi
Macromolecule	CRUZIPAIN (protein)
Unique Ligands	T10

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1NH9 \| pdb_00001nh9	Download File View File

Crystal Structure of a DNA Binding Protein Mja10b from the hyperthermophile Methanococcus jannaschii

Wang, G., Bartlam, M., Guo, R., Yang, H., Xue, H., Liu, Y., Huang, L., Rao, Z.

(2003) Protein Sci 12: 2815-2822

Released	2003-12-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	DNA-binding protein Alba (protein)

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1RAX \| pdb_00001rax	Download File View File

RA-DOMAIN OF RAL GUANOSINE-NUCLEOTIDE DISSOCIATION STIMULATOR

Mueller, T.D., Handel, L., Schmieder, P., Oschkinat, H.

To be published

Released	1999-03-19
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	PROTEIN (RA-DOMAIN OF RAL GUANOSINE DISSOCIATION STIMULATOR) (protein)

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1RYQ \| pdb_00001ryq	Download File View File

Putative DNA-directed RNA polymerase, subunit e'' from Pyrococcus Furiosus Pfu-263306-001

Liu, Z.-J., Chen, L., Tempel, W., Shah, A., Arendall III, W.B., Rose, J.P., Brereton, P.S., Izumi, M., Jenney Jr., F.E., Lee, H.S., Poole II, F.L., Shah, C., Sugar, F.J., Adams, M.W.W., Richardson, D.C., Richardson, J.S., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

(2005) Acta Crystallogr D Biol Crystallogr 61: 520-527

Released	2004-08-10
Method	X-RAY DIFFRACTION 1.38 Å
Organisms	Pyrococcus furiosus
Macromolecule	DNA-directed RNA polymerase, subunit e'' (protein)
Unique Ligands	ZN

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1S13 \| pdb_00001s13	Download File View File

Human Heme Oxygenase Oxidatition of alpha- and gamma-meso-Phenylhemes

Wang, J., Niemevz, F., Lad, L., Buldain, G., Poulos, T.L., Ortiz de Montellano, P.R.

(2004) J Biological Chem 279: 42593-42604

Released	2004-08-24
Method	X-RAY DIFFRACTION 2.29 Å
Organisms	Homo sapiens
Macromolecule	Heme oxygenase 1 (protein)
Unique Ligands	2FH

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1T5P \| pdb_00001t5p	Download File View File

Human Heme Oxygenase Oxidation of alpha- and gamma-meso-phenylhemes

Wang, J., Niemevz, F., Lad, L., Buldain, G., Poulos, T.L., Ortiz de Montellano, P.R.

(2004) J Biological Chem 279: 42593-42604

Released	2004-08-24
Method	X-RAY DIFFRACTION 2.11 Å
Organisms	Homo sapiens
Macromolecule	Heme oxygenase 1 (protein)
Unique Ligands	1FH

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1Y9X \| pdb_00001y9x	Download File View File

Solution structure of Archaeon DNA-binding protein ssh10b

Cui, Q., Tong, Y., Wang, J.

(2008) Biochemistry 47: 11212-11221

Released	2005-06-21
Method	SOLUTION NMR
Organisms	Saccharolobus shibatae
Macromolecule	DNA/RNA-binding protein Alba 1 (protein)

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1YCY \| pdb_00001ycy	Download File View File

Conserved hypothetical protein Pfu-1806301-001 from Pyrococcus furiosus

Huang, L., Liu, Z.-J., Lee, D., Tempel, W., Chang, J., Zhao, M., Habel, J., Xu, H., Chen, L., Nguyen, D., Chang, S.-H., Horanyi, P., Florence, Q., Zhou, W., Lin, D., Zhang, H., Praissman, J., Jenney Jr., F.E., Adams, M.W.W., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2005-02-22
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Pyrococcus furiosus
Macromolecule	Conserved hypothetical protein (protein)

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1YQ3 \| pdb_00001yq3	Download File View File

Avian respiratory complex ii with oxaloacetate and ubiquinone

Huang, L., Cobessi, D., Tung, E.Y., Berry, E.A.

(2006) J Biological Chem 281: 5965-5972

Released	2005-12-20
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Gallus gallus
Macromolecule	SUCCINATE DEHYDROGENASE CYTOCHROME B, LARGE SUBUNIT (protein) SUCCINATE DEHYDROGENASE CYTOCHROME B, SMALL SUBUNIT (protein) Succinate dehydrogenase flavoprotein subunit (protein) succinate dehydrogenase Ip subunit (protein)
Unique Ligands	F3S, FAD, FES, GOL, HEM, JZR, PEE, SF4, TEO, UNL, UQ

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1YQ4 \| pdb_00001yq4	Download File View File

Avian respiratory complex ii with 3-nitropropionate and ubiquinone

Huang, L., Sun, G., Cobessi, D., Wang, A., Shen, J.T., Tung, E.Y., Anderson, V.E., Berry, E.A.

(2006) J Biological Chem 281: 5965-5972

Released	2005-12-20
Method	X-RAY DIFFRACTION 2.33 Å
Organisms	Gallus gallus
Macromolecule	SUCCINATE DEHYDROGENASE CYTOCHROME B, LARGE SUBUNIT (protein) SUCCINATE DEHYDROGENASE CYTOCHROME B, SMALL SUBUNIT (protein) Succinate dehydrogenase flavoprotein subunit (protein) succinate dehydrogenase Ip subunit (protein)
Unique Ligands	3NP, F3S, FAD, FES, GOL, HEM, JZR, PEE, SF4, UQ

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1ZDM \| pdb_00001zdm	Download File View File

Crystal Structure of Activated CheY Bound to Xe

Lowery, T.J., Doucleff, M., Ruiz, E.J., Rubin, S.M., Pines, A., Wemmer, D.E.

(2005) Protein Sci 14: 848-855

Released	2005-04-26
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	Chemotaxis protein cheY (protein)
Unique Ligands	MN, XE

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2B3A \| pdb_00002b3a	Download File View File

Solution structure of the Ras-binding domain of the Ral Guanosine Dissociation Stimulator

Gronwald, W., Maurer, T., Fuechsl, R., Wohlgemuth, S., Herrmann, C., Kalbitzer, H.R.

To be published

Released	2006-09-26
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Ral guanine nucleotide dissociation stimulator (protein)

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2BCC \| pdb_00002bcc	Download File View File

STIGMATELLIN-BOUND CYTOCHROME BC1 COMPLEX FROM CHICKEN

Zhang, Z., Huang, L., Shulmeister, V.M., Chi, Y.I., Kim, K.K., Hung, L.W., Crofts, A.R., Berry, E.A., Kim, S.H.

(1998) Nature 392: 677-684

Released	1999-08-02
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Gallus gallus
Macromolecule	Unique protein chains: 10
Unique Ligands	BOG, FES, HEM, PEE, SIG, U10

1 to 25 of 430 Structures

Page 1 of 18

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1BCC | pdb_00001bcc

1C4Z | pdb_00001c4z

1D5F | pdb_00001d5f

1DJ0 | pdb_00001dj0

1DUS | pdb_00001dus

1F4V | pdb_00001f4v

1J56 | pdb_00001j56

1KRW | pdb_00001krw

1KRX | pdb_00001krx

1LFD | pdb_00001lfd

1LXD | pdb_00001lxd

1ME3 | pdb_00001me3

1ME4 | pdb_00001me4

1NH9 | pdb_00001nh9

1RAX | pdb_00001rax

1RYQ | pdb_00001ryq

1S13 | pdb_00001s13

1T5P | pdb_00001t5p

1Y9X | pdb_00001y9x

1YCY | pdb_00001ycy

1YQ3 | pdb_00001yq3

1YQ4 | pdb_00001yq4

1ZDM | pdb_00001zdm

2B3A | pdb_00002b3a

2BCC | pdb_00002bcc