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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Hansen, D.T."

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Search Summary

This query matches 5 Structures.

Refinements

Structure Determination Methodology

experimental (5)

Scientific Name of Source Organism

	Escherichia coli BL21(DE3) (1)
	Francisella tularensis subsp. tularensis SCHU S4 (1)
	Saccharomyces cerevisiae (1)
	Saccharomyces cerevisiae S288C (1)
	Severe acute respiratory syndrome coronavirus 2 (1)

Taxonomy

	Bacteria (2)
	Eukaryota (2)
	Riboviria (1)

Experimental Method

	ELECTRON MICROSCOPY (2)
	X-RAY DIFFRACTION (2)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (5)

Refinement Resolution (Å)

	2.5 - 3.0 (2)
	3.5 - 4.0 (2)

Release Date

	2015 - 2019 (3)
	2020 - 2024 (2)

Enzyme Classification Name

	Hydrolases (3)
	Transferases (1)

Symmetry Type

	Asymmetric (3)
	Dihedral (2)

SCOP Classification

	Alpha and beta proteins (a/b) (2)
	Alpha and beta proteins (a+b) (1)
	Artifacts (1)

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1 to 5 of 5 Structures

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2MU4 \| pdb_00002mu4	Download File View File

Structure of F. tularensis Virulence Determinant

Zook, J.J.D.Z., Mo, G.G.M., Craciunescu, F.F.C., Sisco, N.N.S., Hansen, D.D.H., Baravati, B.B.B., Van Horn, W.W.V.H., Cherry, B.B.C., Fromme, P.P.F.

(2015) Structure 23: 1116-1122

Released	2015-06-10
Method	SOLUTION NMR
Organisms	Francisella tularensis subsp. tularensis SCHU S4
Macromolecule	flpp3Sol_2 (protein)

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6OMB \| pdb_00006omb	Download File View File

Cdc48 Hexamer (Subunits A to E) with substrate bound to the central pore

Cooney, I., Han, H., Stewart, M., Carson, R.H., Hansen, D., Price, J.C., Hill, C.P., Shen, P.S.

(2019) Science 365: 502-505

Released	2019-07-17
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Cell division control protein 48 (protein) Substrate of Cdc48 (protein)
Unique Ligands	ADP, BEF, MG

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6OPC \| pdb_00006opc	Download File View File

Cdc48 Hexamer in a complex with substrate and Shp1(Ubx Domain)

Cooney, I., Han, H., Stewart, M., Carson, R.H., Hansen, D., Price, J.C., Hill, C.P., Shen, P.S.

(2019) Science 365: 502-505

Released	2019-07-10
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Cell division control protein 48 (protein) Substrate bound to the central pore of the Cdc48 hexamer (protein) UBX domain-containing protein 1 (protein)
Unique Ligands	ADP, BEF, MG

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6U57 \| pdb_00006u57	Download File View File

KDO8PS Structure Determined at the EuXFEL using Segmented Flow Injection

Botha, S., Ros, A.

(2020) Nat Commun 11: 4511-4511

Released	2020-09-02
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli BL21(DE3)
Macromolecule	2-dehydro-3-deoxyphosphooctonate aldolase (protein)

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7K9P \| pdb_00007k9p	Download File View File

Room temperature structure of NSP15 Endoribonuclease from SARS CoV-2 solved using SFX.

Botha, S., Jernigan, R., Chen, J., Coleman, M.A., Frank, M., Grant, T.D., Hansen, D.T., Ketawala, G., Logeswaran, D., Martin-Garcia, J., Nagaratnam, N., Raj, A.L.L.X., Shelby, M., Yang, J.-H., Yung, M.C., Fromme, P.

(2022) Structure

Released	2020-10-21
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Uridylate-specific endoribonuclease (protein)
Unique Ligands	CIT

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2MU4 | pdb_00002mu4

Structure of F. tularensis Virulence Determinant

6OMB | pdb_00006omb

Cdc48 Hexamer (Subunits A to E) with substrate bound to the central pore

6OPC | pdb_00006opc

Cdc48 Hexamer in a complex with substrate and Shp1(Ubx Domain)

6U57 | pdb_00006u57

KDO8PS Structure Determined at the EuXFEL using Segmented Flow Injection

7K9P | pdb_00007k9p

Room temperature structure of NSP15 Endoribonuclease from SARS CoV-2 solved using SFX.

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2MU4 | pdb_00002mu4

Structure of F. tularensis Virulence Determinant

6OMB | pdb_00006omb

Cdc48 Hexamer (Subunits A to E) with substrate bound to the central pore

6OPC | pdb_00006opc

Cdc48 Hexamer in a complex with substrate and Shp1(Ubx Domain)

6U57 | pdb_00006u57

KDO8PS Structure Determined at the EuXFEL using Segmented Flow Injection

7K9P | pdb_00007k9p

Room temperature structure of NSP15 Endoribonuclease from SARS CoV-2 solved using SFX.