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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Cooper, J."

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Cryphonectria parasitica (6)
	Escherichia coli (2)
	Bos taurus (1)
	Cynara cardunculus (1)
	Escherichia coli BL21 (1)

Taxonomy

	Eukaryota (8)
	Bacteria (3)

Experimental Method

	X-RAY DIFFRACTION (8)
	NEUTRON DIFFRACTION (3)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (2)
	2.0 - 2.5 (7)

Release Date

	1990 - 1994 (3)
	1995 - 1999 (1)
	2005 - 2009 (4)
	2010 - 2014 (3)

Enzyme Classification Name

Hydrolases (11)

Symmetry Type

	Asymmetric (10)
	Cyclic (2)

SCOP Classification

	All beta proteins (7)
	Multi-domain proteins (alpha and beta) (4)

AllSelected

1 to 11 of 11 Structures

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1B5F \| pdb_00001b5f	Download File View File

NATIVE CARDOSIN A FROM CYNARA CARDUNCULUS L.

Frazao, C., Bento, I., Carrondo, M.A.

(1999) J Biological Chem 274: 27694-27701

Released	1999-01-13
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Cynara cardunculus
Macromolecule	PROTEIN (CARDOSIN A) (protein)
Unique branched monosaccharides	BMA, FUC, MAN, NAG

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1EED \| pdb_00001eed	Download File View File

X-ray crystallographic analysis of inhibition of endothiapepsin by cyclohexyl renin inhibitors

Blundell, T.L., Frazao, C., Cooper, J.B.

(1992) Biochemistry 31: 8142-8150

Released	1994-01-31
Method	X-RAY DIFFRACTION 2 Å
Organisms	Cryphonectria parasitica
Macromolecule	ENDOTHIAPEPSIN (protein)
Unique Ligands	0EO

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2BJI \| pdb_00002bji	Download File View File

High Resolution Structure of myo-Inositol Monophosphatase, The Target of Lithium Therapy

Gill, R., Mohammed, F., Badyal, R., Coates, L., Erskine, P., Thompson, D., Cooper, J., Gore, M., Wood, S.

(2005) Acta Crystallogr D Biol Crystallogr 61: 545-555

Released	2005-02-11
Method	X-RAY DIFFRACTION 1.24 Å
Organisms	Bos taurus
Macromolecule	INOSITOL-1(OR 4)-MONOPHOSPHATASE (protein)
Unique Ligands	MG

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2ER6 \| pdb_00002er6	Download File View File

The structure of a synthetic pepsin inhibitor complexed with endothiapepsin.

Cooper, J.B., Foundling, S.I., Szelke, M., Blundell, T.L.

(1987) Eur J Biochem 169: 215-221

Released	1991-01-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Cryphonectria parasitica
Macromolecule	ENDOTHIAPEPSIN (protein) H-256 peptide (protein)

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2JJI \| pdb_00002jji	Download File View File

Endothiapepsin in complex with a gem-diol inhibitor.

Coates, L., Tuan, H.-F., Tomanicek, S.J., Kovalevsky, A., Mustyakimov, M., Erskine, P., Cooper, J.

(2008) J Am Chem Soc 130: 7235

Released	2008-05-27
Method	X-RAY DIFFRACTION 1.57 Å
Organisms	Cryphonectria parasitica
Macromolecule	ENDOTHIAPEPSIN (protein)
Unique Ligands	0QS, SO4

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2JJJ \| pdb_00002jjj	Download File View File

Endothiapepsin in complex with a gem-diol inhibitor.

Coates, L., Tuan, H.-F., Tomanicek, S.J., Kovalevsky, A., Mustyakimov, M., Erskine, P., Cooper, J.

(2008) J Am Chem Soc 130: 7235

Released	2008-05-27
Method	X-RAY DIFFRACTION 1 Å
Organisms	Cryphonectria parasitica
Macromolecule	ENDOTHIAPEPSIN (protein)
Unique Ligands	0QS, SO4

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2VS2 \| pdb_00002vs2	Download File View File

Neutron diffraction structure of endothiapepsin in complex with a gem- diol inhibitor.

Coates, L., Tuan, H.-F., Tomanicek, S., Kovalevsky, A., Mustyakimov, M., Erskine, P., Cooper, J.

(2008) J Am Chem Soc 130: 7235

Released	2008-05-27
Method	NEUTRON DIFFRACTION 2 Å
Organisms	Cryphonectria parasitica
Macromolecule	ENDOTHIAPEPSIN (protein)
Unique Ligands	0QS

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2WYX \| pdb_00002wyx	Download File View File

Neutron structure of a class A Beta-lactamase Toho-1 E166A R274N R276N triple mutant

Tomanicek, S.J., Blakeley, M.P., Cooper, J., Chen, Y., Afonine, P., Coates, L.

(2010) J Mol Biology 396: 1070

Released	2010-01-12
Method	NEUTRON DIFFRACTION 2.1 Å
Organisms	Escherichia coli BL21
Macromolecule	BETA-LACTAMSE TOHO-1 (protein)

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2XQZ \| pdb_00002xqz	Download File View File

Neutron structure of the perdeuterated Toho-1 R274N R276N double mutant beta-lactamase

Tomanicek, S.J., Wang, K.K., Weiss, K.L., Blakeley, M.P., Cooper, J., Chen, Y., Coates, L.

(2011) FEBS Lett 585: 364

Released	2010-12-22
Method	NEUTRON DIFFRACTION 2.1 Å
Organisms	Escherichia coli
Macromolecule	BETA-LACTAMSE TOHO-1 (protein)

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2XR0 \| pdb_00002xr0	Download File View File

Room temperature X-ray structure of the perdeuterated Toho-1 R274N R276N double mutant beta-lactamase

Tomanicek, S.J., Wang, K.K., Weiss, K.L., Blakeley, M.P., Cooper, J., Chen, Y., Coates, L.

(2011) FEBS Lett 585: 364

Released	2010-12-22
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	TOHO-1 BETA-LACTAMASE (protein)
Unique Ligands	SO4

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4ER4 \| pdb_00004er4	Download File View File

HIGH-RESOLUTION X-RAY ANALYSES OF RENIN INHIBITOR-ASPARTIC PROTEINASE COMPLEXES

Foundling, S.I., Watson, F.E., Szelke, M., Blundell, T.L.

(1987) Nature 327: 349-352

Released	1991-04-15
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Cryphonectria parasitica
Macromolecule	ENDOTHIAPEPSIN (protein) H-142 (protein)

1 to 11 of 11 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1B5F | pdb_00001b5f

NATIVE CARDOSIN A FROM CYNARA CARDUNCULUS L.

1EED | pdb_00001eed

X-ray crystallographic analysis of inhibition of endothiapepsin by cyclohexyl renin inhibitors

2BJI | pdb_00002bji

High Resolution Structure of myo-Inositol Monophosphatase, The Target of Lithium Therapy

2ER6 | pdb_00002er6

The structure of a synthetic pepsin inhibitor complexed with endothiapepsin.

2JJI | pdb_00002jji

Endothiapepsin in complex with a gem-diol inhibitor.

2JJJ | pdb_00002jjj

Endothiapepsin in complex with a gem-diol inhibitor.

2VS2 | pdb_00002vs2

Neutron diffraction structure of endothiapepsin in complex with a gem- diol inhibitor.

2WYX | pdb_00002wyx

Neutron structure of a class A Beta-lactamase Toho-1 E166A R274N R276N triple mutant

2XQZ | pdb_00002xqz

Neutron structure of the perdeuterated Toho-1 R274N R276N double mutant beta-lactamase

2XR0 | pdb_00002xr0

Room temperature X-ray structure of the perdeuterated Toho-1 R274N R276N double mutant beta-lactamase

4ER4 | pdb_00004er4

HIGH-RESOLUTION X-RAY ANALYSES OF RENIN INHIBITOR-ASPARTIC PROTEINASE COMPLEXES

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1B5F | pdb_00001b5f

1EED | pdb_00001eed

2BJI | pdb_00002bji

2ER6 | pdb_00002er6

2JJI | pdb_00002jji

2JJJ | pdb_00002jjj

2VS2 | pdb_00002vs2

2WYX | pdb_00002wyx

2XQZ | pdb_00002xqz

2XR0 | pdb_00002xr0

4ER4 | pdb_00004er4