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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Welsch, D."

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Search Summary

This query matches 6,277 Structures.

Refinements

Structure Determination Methodology

experimental (6,277)

Scientific Name of Source Organism

	Pyrococcus horikoshii OT3 (474)
	Saccharolobus solfataricus (348)
	Pyrococcus furiosus (347)
	Saccharolobus solfataricus P2 (321)
	Archaeoglobus fulgidus (314)
	Methanocaldococcus jannaschii (305)
	synthetic construct (250)
	Pyrococcus horikoshii (235)
	Methanocaldococcus jannaschii DSM 2661 (215)
	Pyrococcus furiosus DSM 3638 (209)

More...

Taxonomy

	Archaea (6,277)
	other sequences (250)
	Eukaryota (138)
	Bacteria (99)
	Riboviria (8)
	unclassified sequences (3)
	Adnaviria (1)
	Eukaryota (eukaryotes) (1)
	Viruses incertae sedis (1)

Experimental Method

	X-RAY DIFFRACTION (5,608)
	ELECTRON MICROSCOPY (420)
	SOLUTION NMR (227)
	NEUTRON DIFFRACTION (14)
	ELECTRON CRYSTALLOGRAPHY (11)
	SOLID-STATE NMR (3)
	SOLUTION SCATTERING (1)

Polymer Entity Type

	Protein (6,260)
	DNA (419)
	RNA (355)
	NA-hybrid (4)

Refinement Resolution (Å)

	0.5 - 1.0 (8)
	1.0 - 1.5 (394)
	1.5 - 2.0 (1,686)
	2.0 - 2.5 (1,965)
	2.5 - 3.0 (1,217)
	3.0 - 3.5 (494)
	3.5 - 4.0 (138)
	4.0 - 4.5 (57)
	> 4.5 (93)

Release Date

	1990 - 1994 (7)
	1995 - 1999 (95)
	2000 - 2004 (727)
	2005 - 2009 (1,678)
	2010 - 2014 (1,402)
	2015 - 2019 (1,138)
	2020 - 2024 (1,156)
	2025 - 2029 (74)

Enzyme Classification Name

	Transferases (1,226)
	Hydrolases (1,008)
	Oxidoreductases (487)
	Lyases (478)
	Ligases (361)
	Isomerases (171)
	Translocases (55)

Membrane Protein Annotation

	PDBTM (478)
	MemProtMD (422)
	mpstruc (298)
	OPM (190)

Symmetry Type

	Asymmetric (2,843)
	Cyclic (2,796)
	Dihedral (822)
	Tetrahedral (76)
	Helical (50)
	Octahedral (31)
	Icosahedral (3)

SCOP Classification

	Alpha and beta proteins (a/b) (1,575)
	Alpha and beta proteins (a+b) (996)
	All beta proteins (459)
	All alpha proteins (458)
	Artifacts (458)
	Membrane and cell surface proteins and peptides (234)
	Small proteins (131)
	Low resolution protein structures (21)
	Multi-domain proteins (alpha and beta) (148)
	Peptides (45)

More...

AllSelected

1 to 25 of 6,277 Structures

Page 1 of 252

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1A1S \| pdb_00001a1s	Download File View File

ORNITHINE CARBAMOYLTRANSFERASE FROM PYROCOCCUS FURIOSUS

Villeret, V., Clantin, B., Tricot, C., Legrain, C., Roovers, M., Stalon, V., Glansdorff, N., Van Beeumen, J.

(1998) Proc Natl Acad Sci U S A 95: 2801-2806

Released	1998-06-17
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Pyrococcus furiosus
Macromolecule	ORNITHINE CARBAMOYLTRANSFERASE (protein)

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1A2Z \| pdb_00001a2z	Download File View File

PYRROLIDONE CARBOXYL PEPTIDASE FROM THERMOCOCCUS LITORALIS

Singleton, M.R., Isupov, M.N., Littlechild, J.A.

(1999) Structure 7: 237-244

Released	1998-07-15
Method	X-RAY DIFFRACTION 1.73 Å
Organisms	Thermococcus litoralis
Macromolecule	PYRROLIDONE CARBOXYL PEPTIDASE (protein)
Unique Ligands	SO4

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1A53 \| pdb_00001a53	Download File View File

COMPLEX OF INDOLE-3-GLYCEROLPHOSPHATE SYNTHASE FROM SULFOLOBUS SOLFATARICUS WITH INDOLE-3-GLYCEROLPHOSPHATE AT 2.0 A RESOLUTION

Hennig, M., Darimont, B., Kirschner, K., Jansonius, J.N.

(2002) J Mol Biology 319: 757-766

Released	1999-03-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Saccharolobus solfataricus
Macromolecule	INDOLE-3-GLYCEROLPHOSPHATE SYNTHASE (protein)
Unique Ligands	IGP

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1A6D \| pdb_00001a6d	Download File View File

THERMOSOME FROM T. ACIDOPHILUM

Ditzel, L., Loewe, J., Stock, D., Stetter, K.-O., Huber, H., Huber, R., Steinbacher, S.

(1998) Cell 93: 125-138

Released	1999-03-23
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Thermoplasma acidophilum
Macromolecule	THERMOSOME (ALPHA SUBUNIT) (protein) THERMOSOME (BETA SUBUNIT) (protein)

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1A6E \| pdb_00001a6e	Download File View File

THERMOSOME-MG-ADP-ALF3 COMPLEX

Ditzel, L., Loewe, J., Stock, D., Stetter, K.-O., Huber, H., Huber, R., Steinbacher, S.

(1998) Cell 93: 125-138

Released	1999-03-23
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Thermoplasma acidophilum
Macromolecule	THERMOSOME (ALPHA SUBUNIT) (protein) THERMOSOME (BETA SUBUNIT) (protein)
Unique Ligands	ADP, AF3, MG

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1A76 \| pdb_00001a76	Download File View File

FLAP ENDONUCLEASE-1 FROM METHANOCOCCUS JANNASCHII

Hwang, K.Y., Baek, K., Kim, H., Cho, Y.

(1998) Nat Struct Biol 5: 707-713

Released	1999-08-03
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	FLAP ENDONUCLEASE-1 PROTEIN (protein)
Unique Ligands	MN

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1A77 \| pdb_00001a77	Download File View File

FLAP ENDONUCLEASE-1 FROM METHANOCOCCUS JANNASCHII

Hwang, K.Y., Baek, K., Kim, H., Cho, Y.

(1998) Nat Struct Biol 5: 707-713

Released	1999-08-03
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	FLAP ENDONUCLEASE-1 PROTEIN (protein)
Unique Ligands	MG

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1A79 \| pdb_00001a79	Download File View File

CRYSTAL STRUCTURE OF THE TRNA SPLICING ENDONUCLEASE FROM METHANOCOCCUS JANNASCHII

Li, H., Trotta, C.R., Abelson, J.N.

(1998) Science 280: 279-284

Released	1999-06-01
Method	X-RAY DIFFRACTION 2.28 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	TRNA ENDONUCLEASE (protein)
Unique Ligands	AU, SO4

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1A7W \| pdb_00001a7w	Download File View File

CRYSTAL STRUCTURE OF THE HISTONE HMFB FROM METHANOTHERMUS FERVIDUS

Decanniere, K., Sandman, K., Reeve, J.N., Heinemann, U.

(2000) J Mol Biology 303: 35-47

Released	1999-03-23
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Methanothermus fervidus
Macromolecule	HISTONE HMFB (protein)
Unique Ligands	CL, ZN

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1A8L \| pdb_00001a8l	Download File View File

PROTEIN DISULFIDE OXIDOREDUCTASE FROM ARCHAEON PYROCOCCUS FURIOSUS

Ren, B., Tibbelin, G., Pascale, D., Rossi, M., Bartolucci, S., Ladenstein, R.

(1998) Nat Struct Biol 5: 602-611

Released	1999-03-30
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pyrococcus furiosus
Macromolecule	PROTEIN DISULFIDE OXIDOREDUCTASE (protein)
Unique Ligands	ZN

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1AIS \| pdb_00001ais	Download File View File

TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI

Kosa, P.F., Ghosh, G., Dedecker, B.S., Sigler, P.B.

(1997) Proc Natl Acad Sci U S A 94: 6042-6047

Released	1997-07-07
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Pyrococcus woesei
Macromolecule	PROTEIN (TATA-BINDING PROTEIN) (protein) PROTEIN (TRANSCRIPTION INITIATION FACTOR IIB) (protein) DNA (5'-D(APAPCPTPTPAPCPTPTPTP(5IU)P(5IU)PAPAPAPGPC)-3') (nucleic acid) DNA (5'-D(GPCPTPTPTPAPAPAPAPAPGPTPAPAPGPTPT )-3') (nucleic acid)

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1AJ8 \| pdb_00001aj8	Download File View File

CITRATE SYNTHASE FROM PYROCOCCUS FURIOSUS

Russell, R.J.M., Ferguson, J.M.C., Hough, D.W., Danson, M.J., Taylor, G.L.

(1997) Biochemistry 36: 9983-9994

Released	1997-11-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pyrococcus furiosus
Macromolecule	CITRATE SYNTHASE (protein)
Unique Ligands	CIT, COA

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1AOR \| pdb_00001aor	Download File View File

STRUCTURE OF A HYPERTHERMOPHILIC TUNGSTOPTERIN ENZYME, ALDEHYDE FERREDOXIN OXIDOREDUCTASE

Chan, M.K., Mukund, S., Kletzin, A., Adams, M.W.W., Rees, D.C.

(1995) Science 267: 1463-1469

Released	1995-04-20
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pyrococcus furiosus
Macromolecule	ALDEHYDE FERREDOXIN OXIDOREDUCTASE (protein)
Unique Ligands	FE, NA, PTE, SF4

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1AP9 \| pdb_00001ap9	Download File View File

X-RAY STRUCTURE OF BACTERIORHODOPSIN FROM MICROCRYSTALS GROWN IN LIPIDIC CUBIC PHASES

Pebay-Peyroula, E., Rummel, G., Rosenbusch, J.P., Landau, E.M.

(1997) Science 277: 1676-1681

Released	1998-09-16
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Halobacterium salinarum
Macromolecule	BACTERIORHODOPSIN (protein)
Unique Ligands	RET

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1ASS \| pdb_00001ass	Download File View File

APICAL DOMAIN OF THE CHAPERONIN FROM THERMOPLASMA ACIDOPHILUM

Klumpp, M., Baumeister, W., Essen, L.-O.

(1997) Cell 91: 263-270

Released	1997-12-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thermoplasma acidophilum
Macromolecule	THERMOSOME (protein)
Unique Ligands	NA, PO4

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1ASX \| pdb_00001asx	Download File View File

APICAL DOMAIN OF THE CHAPERONIN FROM THERMOPLASMA ACIDOPHILUM

Klumpp, M., Baumeister, W., Essen, L.-O.

(1997) Cell 91: 263-270

Released	1997-12-03
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Thermoplasma acidophilum
Macromolecule	THERMOSOME (protein)
Unique Ligands	PO4

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1AT9 \| pdb_00001at9	Download File View File

STRUCTURE OF BACTERIORHODOPSIN AT 3.0 ANGSTROM DETERMINED BY ELECTRON CRYSTALLOGRAPHY

Kimura, Y., Vassylyev, D.G., Miyazawa, A., Kidera, A., Matsushima, M., Mitsuoka, K., Murata, K., Hirai, T., Fujiyoshi, Y.

(1997) Nature 389: 206-211

Released	1998-09-16
Method	ELECTRON CRYSTALLOGRAPHY 2.8 Å
Organisms	Halobacterium salinarum
Macromolecule	BACTERIORHODOPSIN (protein)
Unique Ligands	RET

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1AZP \| pdb_00001azp	Download File View File

HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX

Robinson, H., Gao, Y.-G., Mccrary, B.S., Edmondson, S.P., Shriver, J.W., Wang, A.H.-J.

(1998) Nature 392: 202-205

Released	1999-01-13
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Sulfolobus acidocaldarius
Macromolecule	PROTEIN (HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D) (protein) DNA (5'-D(GPCPGPAPTPCPGPC)-3') (nucleic acid)

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1AZQ \| pdb_00001azq	Download File View File

HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX

Robinson, H., Gao, Y.-G., Mccrary, B.S., Edmondson, S.P., Shriver, J.W., Wang, A.H.-J.

(1998) Nature 392: 202-205

Released	1999-01-13
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Sulfolobus acidocaldarius
Macromolecule	PROTEIN (HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D) (protein) DNA (5'-D(GPTPAPAPTPTPAPC)-3') (nucleic acid)

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1B06 \| pdb_00001b06	Download File View File

SUPEROXIDE DISMUTASE FROM SULFOLOBUS ACIDOCALDARIUS

Knapp, S., Kardinahl, S., Niklas, H., Tibbelin, G., Schafer, G., Ladenstein, R.

(1999) J Mol Biology 285: 689-702

Released	1999-11-18
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Sulfolobus acidocaldarius DSM 639
Macromolecule	PROTEIN (SUPEROXIDE DISMUTASE) (protein)
Unique Ligands	FE

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1B24 \| pdb_00001b24	Download File View File

I-DMOI, INTRON-ENCODED ENDONUCLEASE

Van Roey, P., Silva, G.H.

(1999) J Mol Biology 286: 1123-1136

Released	1999-03-24
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Desulfurococcus mucosus
Macromolecule	Homing endonuclease I-DmoI (protein)

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1B25 \| pdb_00001b25	Download File View File

FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE FROM PYROCOCCUS FURIOSUS

Hu, Y.L., Faham, S., Roy, R., Adams, M.W.W., Rees, D.C.

(1999) J Mol Biology 286: 899-914

Released	1999-03-24
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Pyrococcus furiosus
Macromolecule	PROTEIN (FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE) (protein)
Unique Ligands	PTT, SF4

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1B43 \| pdb_00001b43	Download File View File

FEN-1 FROM P. FURIOSUS

Hosfield, D.J., Mol, C.D., Shen, B., Tainer, J.A.

(1998) Cell 95: 135-146

Released	2000-01-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pyrococcus furiosus
Macromolecule	PROTEIN (FEN-1) (protein)

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1B4N \| pdb_00001b4n	Download File View File

FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE FROM PYROCOCCUS FURIOSUS, COMPLEXED WITH GLUTARATE

Hu, Y.L., Faham, S., Roy, R., Adams, M.W.W., Rees, D.C.

(1999) J Mol Biology 286: 899-914

Released	1999-05-18
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Pyrococcus furiosus
Macromolecule	FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE (protein)
Unique Ligands	CA, GUA, PTE, SF4