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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Magari, F."

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Search Summary

This query matches 147 Structures.

Refinements

Structure Determination Methodology

experimental (147)

Scientific Name of Source Organism

	Thermosynechococcus vestitus BP-1 (16)
	Synechocystis sp. PCC 6803 substr. Kazusa (13)
	Thermostichus vulcanus (9)
	Leptolyngbya sp. O-77 (8)
	Anthocerotibacter panamensis (7)
	Nostoc sp. PCC 7120 = FACHB-418 (6)
	Synechocystis sp. PCC 6803 (6)
	Glycine max (5)
	Porphyridium purpureum (5)
	Synechococcus sp. JA-2-3B'a(2-13) (5)

More...

Taxonomy

	Bacteria (118)
	Eukaryota (29)

Experimental Method

	X-RAY DIFFRACTION (106)
	ELECTRON MICROSCOPY (34)
	SOLUTION NMR (7)

Polymer Entity Type

Protein (147)

Refinement Resolution (Å)

	1.0 - 1.5 (10)
	1.5 - 2.0 (28)
	2.0 - 2.5 (38)
	2.5 - 3.0 (38)
	3.0 - 3.5 (15)
	3.5 - 4.0 (8)
	4.0 - 4.5 (2)
	> 4.5 (1)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (4)
	2000 - 2004 (9)
	2005 - 2009 (16)
	2010 - 2014 (20)
	2015 - 2019 (30)
	2020 - 2024 (63)
	2025 - 2029 (4)

Enzyme Classification Name

	Transferases (18)
	Oxidoreductases (4)
	Lyases (11)

Membrane Protein Annotation

mpstruc (3)

Symmetry Type

	Cyclic (69)
	Asymmetric (50)
	Dihedral (44)
	Octahedral (1)

SCOP Classification

	All alpha proteins (56)
	Alpha and beta proteins (a+b) (16)
	Artifacts (15)

AllSelected

1 to 25 of 147 Structures

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1ALL \| pdb_00001all	Download File View File

ALLOPHYCOCYANIN

Brejc, K., Ficner, R., Huber, R., Steinbacher, S.

(1995) J Mol Biology 249: 424-440

Released	1996-07-11
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Arthrospira platensis
Macromolecule	ALLOPHYCOCYANIN (protein)
Unique Ligands	CYC

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1B33 \| pdb_00001b33	Download File View File

STRUCTURE OF LIGHT HARVESTING COMPLEX OF ALLOPHYCOCYANIN ALPHA AND BETA CHAINS/CORE-LINKER COMPLEX AP*LC7.8

Reuter, W., Wiegand, G., Huber, R., Than, M.E.

(1999) Proc Natl Acad Sci U S A 96: 1363-1368

Released	1999-02-23
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mastigocladus laminosus
Macromolecule	ALLOPHYCOCYANIN, ALPHA CHAIN (protein) ALLOPHYCOCYANIN, BETA CHAIN (protein) PHYCOBILISOME 7.8 KD LINKER POLYPEPTIDE (protein)
Unique Ligands	BO4, CYC

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1CPC \| pdb_00001cpc	Download File View File

ISOLATION, CRYSTALLIZATION, CRYSTAL STRUCTURE ANALYSIS AND REFINEMENT OF CONSTITUTIVE C-PHYCOCYANIN FROM THE CHROMATICALLY ADAPTING CYANOBACTERIUM FREMYELLA DIPLOSIPHON AT 1.66 ANGSTROMS RESOLUTION

Duerring, M., Schmidt, G.B., Huber, R.

(1991) J Mol Biology 217: 577-592

Released	1993-01-15
Method	X-RAY DIFFRACTION 1.66 Å
Organisms	Microchaete diplosiphon
Macromolecule	C-PHYCOCYANIN (ALPHA SUBUNIT) (protein) C-PHYCOCYANIN (BETA SUBUNIT) (protein)
Unique Ligands	CYC

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1EYX \| pdb_00001eyx	Download File View File

CRYSTAL STRUCTURE OF R-PHYCOERYTHRIN AT 2.2 ANGSTROMS

Contreras-Martel, C., Legrand, P., Piras, C., Vernede, X., Martinez-Oyanedel, J., Bunster, M., Fontecilla-Camps, J.C.

(2001) Acta Crystallogr D Biol Crystallogr 57: 52-60

Released	2000-11-22
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Agarophyton chilense
Macromolecule	R-PHYCOERYTHRIN (protein)
Unique Ligands	CYC, PUB, SO4

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1F99 \| pdb_00001f99	Download File View File

CRYSTAL STRUCTURE OF R-PHYCOCYANIN FROM POLYSIPHONIA AT 2.4 A RESOLUTION

Liang, D.C., Jiang, T., Chang, W.R.

(2001) Biophys J 81: 1171-1179

Released	2001-07-09
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Polysiphonia stricta
Macromolecule	R-PHYCOCYANIN (protein)
Unique Ligands	CYC, PEB

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1GH0 \| pdb_00001gh0	Download File View File

CRYSTAL STRUCTURE OF C-PHYCOCYANIN FROM SPIRULINA PLATENSIS

Liang, D.-C., Chang, W.-R., Wang, X.-Q.

(2001) Acta Crystallogr D Biol Crystallogr 57: 784-792

Released	2001-06-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Arthrospira platensis
Macromolecule	C-PHYCOCYANIN ALPHA SUBUNIT (protein) C-PHYCOCYANIN BETA SUBUNIT (protein)
Unique Ligands	CYC

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1HA7 \| pdb_00001ha7	Download File View File

STRUCTURE OF A LIGHT-HARVESTING PHYCOBILIPROTEIN, C-PHYCOCYANIN FROM SPIRULINA PLATENSIS AT 2.2A RESOLUTION

Padyana, A.K., Rajashankar, K.R., Ramakumar, S.

(2001) Biochem Biophys Res Commun 282: 893

Released	2002-03-28
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Arthrospira platensis
Macromolecule	C-PHYCOCYANIN ALPHA CHAIN (protein) C-PHYCOCYANIN BETA CHAIN (protein)
Unique Ligands	CYC

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1I7Y \| pdb_00001i7y	Download File View File

CRYSTAL STRUCTURE OF C-PHYCOCYANIN OF SYNECHOCOCCUS VULCANUS AT 2.5 ANGSTROMS.

Adir, N., Dobrovetsky, E., Lerner, N.

(2001) J Mol Biology 313: 71-81

Released	2001-03-28
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Thermostichus vulcanus
Macromolecule	C-phycocyanin alpha subunit (Fragment) (protein) C-phycocyanin beta subunit (Fragment) (protein)
Unique Ligands	CYC

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1JBO \| pdb_00001jbo	Download File View File

The 1.45A Three-Dimensional Structure of c-Phycocyanin from the Thermophylic Cyanobacterium Synechococcus elongatus

Nield, J., Rizkallah, P.J., Barber, J., Chayen, N.E.

(2003) J Struct Biol 141: 149-155

Released	2003-03-18
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Synechococcus elongatus
Macromolecule	C-Phycocyanin alpha chain (protein) C-Phycocyanin beta chain (protein)
Unique Ligands	CYC

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1KN1 \| pdb_00001kn1	Download File View File

Crystal structure of allophycocyanin

Liang, D.C., Liu, J.Y., Jiang, T., Zhang, J.P., Chang, W.R.

(1999) J Biological Chem 274: 16945-16952

Released	2002-12-18
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Pyropia yezoensis
Macromolecule	Allophycocyanin (protein)
Unique Ligands	CYC

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1KTP \| pdb_00001ktp	Download File View File

Crystal structure of c-phycocyanin of synechococcus vulcanus at 1.6 angstroms

Adir, N., Dobrovetsky, E., Lerner, N.

(2002) Biochim Biophys Acta 1556: 168-174

Released	2002-03-06
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Thermostichus vulcanus
Macromolecule	C-PHYCOCYANIN ALPHA SUBUNIT (protein) C-PHYCOCYANIN BETA SUBUNIT (protein)
Unique Ligands	CYC

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1LIA \| pdb_00001lia	Download File View File

CRYSTAL STRUCTURE OF R-PHYCOERYTHRIN FROM POLYSIPHONIA AT 2.8 A RESOLUTION

Liang, D.C., Jiang, T., Chang, W.R.

(1996) J Mol Biology 262: 721-731

Released	1997-07-29
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Polysiphonia stricta
Macromolecule	R-PHYCOERYTHRIN (protein)
Unique Ligands	CYC, PUB

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1ON7 \| pdb_00001on7	Download File View File

Unmethylated form of C-phycocyanin from Themosynechococcus vulcanus at 2.7A

Adir, N., Lerner, N.

(2003) J Biological Chem 278: 25926-25932

Released	2003-07-29
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Thermostichus vulcanus
Macromolecule	C-phycocyanin alpha subunit (protein) C-phycocyanin beta subunit (protein)
Unique Ligands	CYC

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1PHN \| pdb_00001phn	Download File View File

STRUCTURE OF PHYCOCYANIN FROM CYANIDIUM CALDARIUM AT 1.65A RESOLUTION

Stec, B., Troxler, R.F., Teeter, M.M.

(1999) Biophys J 76: 2912-2921

Released	1997-09-17
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Cyanidium caldarium
Macromolecule	PHYCOCYANIN (protein)
Unique Ligands	CYC, PEB

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2BV8 \| pdb_00002bv8	Download File View File

The crystal structure of Phycocyanin from Gracilaria chilensis.

Contreras-Martel, C., Martinez-Oyanedel, J., Poo-Caama, G., Bruna, C., Bunster, M.

(2007) Biophys Chem 125: 388

Released	2006-08-16
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Agarophyton chilense
Macromolecule	C-PHYCOCYANIN ALPHA SUBUNIT (protein) C-PHYCOCYANIN BETA SUBUNIT (protein)
Unique Ligands	CYC, PEB

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2C7J \| pdb_00002c7j	Download File View File

Phycoerythrocyanin from Mastigocladus laminosus, 295 K, 3.0 A

Schmidt, M., Krasselt, A., Reuter, W.

(2006) Biochim Biophys Acta 1764: 55

Released	2006-01-25
Method	X-RAY DIFFRACTION 3 Å
Organisms	Mastigocladus laminosus
Macromolecule	Phycoerythrocyanin alpha chain (protein) Phycoerythrocyanin beta chain (protein)
Unique Ligands	CYC

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2C7K \| pdb_00002c7k	Download File View File

Laue structure of phycoerythrocyanin from Mastigocladus laminosus

Schmidt, M., Krasselt, A., Reuter, W.

(2006) Biochim Biophys Acta 1764: 55

Released	2006-01-25
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Mastigocladus laminosus
Macromolecule	Phycoerythrocyanin alpha chain (protein) Phycoerythrocyanin beta chain (protein)
Unique Ligands	CYC

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2C7L \| pdb_00002c7l	Download File View File

Low temperature structure of phycoerythrocyanin from Mastigocladus laminosus

Schmidt, M., Krasselt, A., Reuter, W.

(2006) Biochim Biophys Acta 1764: 55

Released	2006-01-25
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Mastigocladus laminosus
Macromolecule	Phycoerythrocyanin alpha chain (protein) Phycoerythrocyanin beta chain (protein)
Unique Ligands	CYC

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2K2N \| pdb_00002k2n	Download File View File

Solution structure of a cyanobacterial phytochrome GAF domain in the red light-absorbing ground state

Cornilescu, C.C., Cornilescu, G., Ulijasz, A.T., Vierstra, R.D., Markley, J.L.

(2008) J Mol Biology 383: 403-413

Released	2008-09-23
Method	SOLUTION NMR
Organisms	Synechococcus sp. RCC307
Macromolecule	Sensor protein (protein)
Unique Ligands	CYC

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2KLI \| pdb_00002kli	Download File View File

Structural Basis for the Photoconversion of A Phytochrome to the Activated FAR-RED LIGHT-ABSORBING Form

Cornilescu, C.C., Cornilescu, G., Ulijasz, A.T., Zhang, J., Rivera, M., Vierstra, R.D., Markley, J.L., Center for Eukaryotic Structural Genomics (CESG)

(2010) Nature 463: 250-254

Released	2009-11-03
Method	SOLUTION NMR
Organisms	Synechococcus sp. JA-2-3B'a(2-13)
Macromolecule	Sensor protein (protein)
Unique Ligands	CYC

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2KOI \| pdb_00002koi	Download File View File

Refined solution structure of a cyanobacterial phytochrome GAF domain in the red light-absorbing ground state

Cornilescu, C.C., Cornilescu, G., Ulijasz, A.T., Vierstra, R.D., Markley, J.L., Center for Eukaryotic Structural Genomics (CESG)

(2010) Nature 463: 250-254

Released	2009-11-03
Method	SOLUTION NMR
Organisms	Synechococcus sp. JA-2-3B'a(2-13)
Macromolecule	Sensor protein (protein)
Unique Ligands	CYC

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2LB5 \| pdb_00002lb5	Download File View File

Refined Structural Basis for the Photoconversion of A Phytochrome to the Activated FAR-RED LIGHT-ABSORBING Form

Cornilescu, C.C., Cornilescu, G., Ulijasz, A.T., Vierstra, R.D., Markley, J.L.

(2010) Nature 463: 250-254

Released	2011-06-29
Method	SOLUTION NMR
Organisms	Synechococcus sp. JA-2-3B'a(2-13)
Macromolecule	Sensor histidine kinase (protein)
Unique Ligands	CYC

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2LB9 \| pdb_00002lb9	Download File View File

Refined solution structure of a cyanobacterial phytochrome gaf domain in the red light-absorbing ground state (corrected pyrrole ring planarity)

Cornilescu, C.C., Cornilescu, G., Ulijasz, A.T., Vierstra, R.D., Markley, J.L.

(2008) J Mol Biology 383: 403-413

Released	2011-06-29
Method	SOLUTION NMR
Organisms	Synechococcus sp. JA-2-3B'a(2-13)
Macromolecule	Sensor histidine kinase (protein)
Unique Ligands	CYC

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2UUL \| pdb_00002uul	Download File View File

Crystal structure of C-phycocyanin from Phormidium, Lyngbya spp. (Marine) and Spirulina sp. (Fresh water) shows two different ways of energy transfer between two hexamers.

Satyanarayana, L., Patel, A., Mishra, S., K Ghosh, P., Suresh, C.G.

To be published

Released	2008-05-27
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Phormidium sp.
Macromolecule	C-PHYCOCYANIN ALPHA CHAIN (protein) C-PHYCOCYANIN BETA CHAIN (protein)
Unique Ligands	BLA, CYC

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2UUM \| pdb_00002uum	Download File View File

Crystal structure of C-phycocyanin from Phormidium, Lyngbya spp. (Marine) and Spirulina sp. (Fresh water) shows two different ways of energy transfer between two hexamers.

Satyanarayana, L., Patel, A., Mishra, S., K Ghosh, P., Suresh, C.G.

To be published

Released	2008-05-27
Method	X-RAY DIFFRACTION 3 Å
Organisms	Spirulina sp.
Macromolecule	C-PHYCOCYANIN ALPHA CHAIN (protein) C-PHYCOCYANIN BETA CHAIN (protein)
Unique Ligands	BLA, CYC

1 to 25 of 147 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1ALL | pdb_00001all

1B33 | pdb_00001b33

1CPC | pdb_00001cpc

1EYX | pdb_00001eyx

1F99 | pdb_00001f99

1GH0 | pdb_00001gh0

1HA7 | pdb_00001ha7

1I7Y | pdb_00001i7y

1JBO | pdb_00001jbo

1KN1 | pdb_00001kn1

1KTP | pdb_00001ktp

1LIA | pdb_00001lia

1ON7 | pdb_00001on7

1PHN | pdb_00001phn

2BV8 | pdb_00002bv8

2C7J | pdb_00002c7j

2C7K | pdb_00002c7k

2C7L | pdb_00002c7l

2K2N | pdb_00002k2n

2KLI | pdb_00002kli

2KOI | pdb_00002koi

2LB5 | pdb_00002lb5

2LB9 | pdb_00002lb9

2UUL | pdb_00002uul

2UUM | pdb_00002uum