RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

235,183 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Jones, I.M."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 9 Structures.

Refinements

Structure Determination Methodology

experimental (9)

Scientific Name of Source Organism

	Foot-and-mouth disease virus A (3)
	Foot-and-mouth disease virus O (2)
	Autographa californica nucleopolyhedrovirus (1)
	Foot-and-mouth disease virus SAT 2 (1)
	Simian immunodeficiency virus (1)
	Simian immunodeficiency virus - mac (1)

Taxonomy

	Riboviria (8)
	Viruses incertae sedis (1)

Experimental Method

	X-RAY DIFFRACTION (7)
	ELECTRON MICROSCOPY (2)

Polymer Entity Type

Protein (9)

Refinement Resolution (Å)

	2.0 - 2.5 (4)
	2.5 - 3.0 (2)
	3.0 - 3.5 (1)
	3.5 - 4.0 (2)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (1)
	2010 - 2014 (2)
	2015 - 2019 (4)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Icosahedral (6)
	Cyclic (3)

SCOP Classification

	All beta proteins (3)
	All alpha proteins (2)

AllSelected

1 to 9 of 9 Structures

Page 1 of 1

Sort by

Explore in 3D

1ECW \| pdb_00001ecw	Download File View File

CRYSTAL STRUCTURE OF SIMIAN IMMUNODEFICIENCY VIRUS MATRIX ANTIGEN (SIV MA) AT 293K.

Rao, Z., Belyaev, A., Fry, E., Roy, P., Jones, I.M., Stuart, D.I.

(1995) Nature 378: 743-747

Released	2000-02-16
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Simian immunodeficiency virus
Macromolecule	GAG POLYPROTEIN (protein)
Unique Ligands	IPA

Explore in 3D

1ED1 \| pdb_00001ed1	Download File View File

CRYSTAL STRUCTURE OF SIMIAN IMMUNODEFICIENCY VIRUS MATRIX ANTIGEN (SIV MA) AT 100K.

Rao, Z., Belyaev, A., Fry, E., Roy, P., Jones, I.M., Stuart, D.I.

(1995) Nature 378: 743-747

Released	2000-02-16
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Simian immunodeficiency virus - mac
Macromolecule	GAG POLYPROTEIN (protein)
Unique Ligands	IPA

Explore in 3D

3DUZ \| pdb_00003duz	Download File View File

Crystal structure of the postfusion form of baculovirus fusion protein GP64

Kadlec, J., Loureiro, S., Abrescia, N.G.A., Jones, I.M., Stuart, D.I.

(2008) Nat Struct Mol Biol 15: 1024-1030

Released	2008-09-16
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Autographa californica nucleopolyhedrovirus
Macromolecule	Major envelope glycoprotein (protein)
Unique Ligands	HG

Explore in 3D

4IV1 \| pdb_00004iv1	Download File View File

Crystal structure of recombinant foot-and-mouth-disease virus A22 empty capsid

Porta, C., Kotecha, A., Burman, A., Jackson, T., Ren, J., Loureiro, S., Jones, I.M., Fry, E.E., Stuart, D.I., Charleston, B.

(2013) PLoS Pathog 9: e1003255-e1003255

Released	2013-04-17
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Foot-and-mouth disease virus A
Macromolecule	Capsid protein VP1 (protein) Capsid protein VP2 (protein) Capsid protein VP3 (protein) Capsid protein VP4 (protein)

Explore in 3D

4IV3 \| pdb_00004iv3	Download File View File

Crystal structure of recombinant foot-and-mouth-disease virus A22-H2093C empty capsid

Porta, C., Kotecha, A., Burman, A., Jackson, T., Ren, J., Loureiro, S., Jones, I.M., Fry, E.E., Stuart, D.I., Charleston, B.

(2013) PLoS Pathog 9: e1003255-e1003255

Released	2013-04-17
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Foot-and-mouth disease virus A
Macromolecule	Capsid protein VP1 (protein) Capsid protein VP2 (protein) Capsid protein VP3 (protein) Capsid protein VP4 (protein)

Explore in 3D

5AC9 \| pdb_00005ac9	Download File View File

Structure-based energetics of protein interfaces guide Foot-and-Mouth disease virus vaccine design

Kotecha, A., Seago, J., Scott, K., Burman, A., Loureiro, S., Ren, J., Porta, C., Ginn, H.M., Jackson, T., PerezMartin, E., Siebert, C.A., Paul, G., Huiskonen, J.T., Jones, I.M., Esnouf, R.M., Fry, E.E., Maree, F.F., Charleston, B., Stuart, D.I.

(2015) Nat Struct Mol Biol 22: 788

Released	2015-09-23
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Foot-and-mouth disease virus O
Macromolecule	VP1 (protein) VP2 (protein) VP3 (protein) VP4 (protein)

Explore in 3D

5ACA \| pdb_00005aca	Download File View File

Structure-based energetics of protein interfaces guide Foot-and-Mouth disease virus vaccine design

Kotecha, A., Seago, J., Scott, K., Burman, A., Loureiro, S., Ren, J., Porta, C., Ginn, H.M., Jackson, T., Perez-Martin, E., Siebert, C.A., Paul, G., Huiskonen, J.T., Jones, I.M., Esnouf, R.M., Fry, E.E., Maree, F.F., Charleston, B., Stuart, D.I.

(2015) Nat Struct Mol Biol 22: 788

Released	2015-09-23
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Foot-and-mouth disease virus SAT 2
Macromolecule	VP1 (protein) VP2 (protein) VP3 (protein) VP4 (protein)

Explore in 3D

5D8A \| pdb_00005d8a	Download File View File

Crystal structure of recombinant foot-and-mouth-disease virus A22-H2093F empty capsid

(2015) Nat Struct Mol Biol 22: 788-794

Released	2015-09-23
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Foot-and-mouth disease virus A
Macromolecule	VP1 (protein) VP2 (protein) VP3 (protein) VP4 (protein)

Explore in 3D

5DDJ \| pdb_00005ddj	Download File View File

Crystal structure of recombinant foot-and-mouth-disease virus O1M-S2093Y empty capsid

(2015) Nat Struct Mol Biol 22: 788-794

Released	2015-09-23
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Foot-and-mouth disease virus O
Macromolecule	Foot and mouth disease virus, VP1 (protein) Foot and mouth disease virus, VP2 (protein) Foot and mouth disease virus, VP3 (protein) Genome polyprotein (protein)

1 to 9 of 9 Structures

Page 1 of 1

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1ECW | pdb_00001ecw

CRYSTAL STRUCTURE OF SIMIAN IMMUNODEFICIENCY VIRUS MATRIX ANTIGEN (SIV MA) AT 293K.

1ED1 | pdb_00001ed1

CRYSTAL STRUCTURE OF SIMIAN IMMUNODEFICIENCY VIRUS MATRIX ANTIGEN (SIV MA) AT 100K.

3DUZ | pdb_00003duz

Crystal structure of the postfusion form of baculovirus fusion protein GP64

4IV1 | pdb_00004iv1

Crystal structure of recombinant foot-and-mouth-disease virus A22 empty capsid

4IV3 | pdb_00004iv3

Crystal structure of recombinant foot-and-mouth-disease virus A22-H2093C empty capsid

5AC9 | pdb_00005ac9

Structure-based energetics of protein interfaces guide Foot-and-Mouth disease virus vaccine design

5ACA | pdb_00005aca

Structure-based energetics of protein interfaces guide Foot-and-Mouth disease virus vaccine design

5D8A | pdb_00005d8a

Crystal structure of recombinant foot-and-mouth-disease virus A22-H2093F empty capsid

5DDJ | pdb_00005ddj

Crystal structure of recombinant foot-and-mouth-disease virus O1M-S2093Y empty capsid

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1ECW | pdb_00001ecw

1ED1 | pdb_00001ed1

3DUZ | pdb_00003duz

4IV1 | pdb_00004iv1

4IV3 | pdb_00004iv3

5AC9 | pdb_00005ac9

5ACA | pdb_00005aca

5D8A | pdb_00005d8a

5DDJ | pdb_00005ddj