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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Chai, J."

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Search Summary

This query matches 89 Structures.

Refinements

Structure Determination Methodology

experimental (89)

Scientific Name of Source Organism

	Arabidopsis thaliana (34)
	Homo sapiens (19)
	Arabidopsis (9)
	Salmonella enterica subsp. enterica serovar Typhimurium (5)
	Chlamydia trachomatis (4)
	Drosophila melanogaster (4)
	Escherichia coli (4)
	Linum usitatissimum (4)
	DNA molecule (3)
	Daucus carota (3)

More...

Taxonomy

	Eukaryota (74)
	Bacteria (20)
	Eukaryota (eukaryotes) (3)
	unclassified sequences (3)
	other sequences (2)
	Riboviria (1)

Experimental Method

	X-RAY DIFFRACTION (78)
	ELECTRON MICROSCOPY (11)

Polymer Entity Type

	Protein (89)
	DNA (4)
	RNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (14)
	2.0 - 2.5 (28)
	2.5 - 3.0 (27)
	3.0 - 3.5 (12)
	3.5 - 4.0 (6)
	4.0 - 4.5 (1)

Release Date

	2000 - 2004 (14)
	2005 - 2009 (15)
	2010 - 2014 (16)
	2015 - 2019 (24)
	2020 - 2024 (20)

Enzyme Classification Name

	Transferases (36)
	Hydrolases (12)
	Lyases (8)
	Oxidoreductases (5)
	Ligases (3)

Membrane Protein Annotation

	OPM (2)
	PDBTM (2)
	MemProtMD (1)
	mpstruc (1)

Symmetry Type

	Asymmetric (67)
	Cyclic (22)
	Dihedral (4)

SCOP Classification

	Small proteins (7)
	Alpha and beta proteins (a/b) (6)
	All beta proteins (5)
	Alpha and beta proteins (a+b) (3)
	All alpha proteins (2)
	Artifacts (2)

AllSelected

1 to 25 of 89 Structures

Page 1 of 4

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1FEW \| pdb_00001few	Download File View File

CRYSTAL STRUCTURE OF SMAC/DIABLO

Chai, J., Shi, Y.

(2000) Nature 406: 855-862

Released	2000-09-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	SECOND MITOCHONDRIA-DERIVED ACTIVATOR OF CASPASES (protein)

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1G73 \| pdb_00001g73	Download File View File

CRYSTAL STRUCTURE OF SMAC BOUND TO XIAP-BIR3 DOMAIN

Wu, G., Chai, J., Suber, T.L., Wu, J.-W., Shi, Y.

(2000) Nature 408: 1008-1012

Released	2001-01-10
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	INHIBITORS OF APOPTOSIS-LIKE PROTEIN ILP (protein) SECOND MITOCHONDRIA-DERIVED ACTIVATOR OF CASPASES (protein)
Unique Ligands	ZN

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1I51 \| pdb_00001i51	Download File View File

CRYSTAL STRUCTURE OF CASPASE-7 COMPLEXED WITH XIAP

Chai, J., Shi, Y.

(2001) Cell 104: 769-780

Released	2002-02-23
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Homo sapiens
Macromolecule	CASPASE-7 SUBUNIT P11 (protein) CASPASE-7 SUBUNIT P20 (protein) X-LINKED INHIBITOR OF APOPTOSIS PROTEIN (protein)

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1JD4 \| pdb_00001jd4	Download File View File

Crystal Structure of DIAP1-BIR2

Wu, J.W., Cocina, A.E., Chai, J., Hay, B.A., Shi, Y.

(2001) Mol Cell 8: 95-104

Released	2001-12-05
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Drosophila melanogaster
Macromolecule	APOPTOSIS 1 INHIBITOR (protein)
Unique Ligands	ZN

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1JD5 \| pdb_00001jd5	Download File View File

Crystal Structure of DIAP1-BIR2/GRIM

Wu, J.W., Cocina, A.E., Chai, J., Hay, B.A., Shi, Y.

(2001) Mol Cell 8: 95-104

Released	2001-12-05
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Drosophila melanogaster
Macromolecule	APOPTOSIS 1 INHIBITOR (protein) cell death protein GRIM (protein)
Unique Ligands	ZN

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1JD6 \| pdb_00001jd6	Download File View File

Crystal Structure of DIAP1-BIR2/Hid Complex

Wu, J.W., Cocina, A.E., Chai, J., Hay, B.A., Shi, Y.

(2001) Mol Cell 8: 95-104

Released	2001-12-05
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Drosophila melanogaster
Macromolecule	APOPTOSIS 1 INHIBITOR (protein) head involution defective protein (protein)
Unique Ligands	ZN

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1K86 \| pdb_00001k86	Download File View File

Crystal structure of caspase-7

Chai, J., Wu, Q., Shiozaki, E., Srinivasa, S.M., Alnemri, E.S., Shi, Y.

(2001) Cell 107: 299-407

Released	2001-11-21
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	caspase-7 (protein)

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1K88 \| pdb_00001k88	Download File View File

Crystal structure of procaspase-7

Chai, J., Wu, Q., Shiozaki, E., Srinivasa, S.M., Alnemri, E.S., Shi, Y.

(2001) Cell 107: 399-407

Released	2001-11-21
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	procaspase-7 (protein)

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1KHX \| pdb_00001khx	Download File View File

Crystal structure of a phosphorylated Smad2

Wu, J.-W., Hu, M., Chai, J., Seoane, J., Huse, M., Kyin, S., Muir, T.W., Fairman, R., Massague, J., Shi, Y.

(2001) Mol Cell 8: 1277-1289

Released	2002-02-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Smad2 (protein)

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1LCY \| pdb_00001lcy	Download File View File

Crystal Structure of the Mitochondrial Serine Protease HtrA2

Li, W., Srinivasula, S.M., Chai, J., Li, P., Wu, J.W., Zhang, Z., Alnemri, E.S., Shi, Y.

(2002) Nat Struct Biol 9: 436-441

Released	2002-05-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	HtrA2 serine protease (protein)

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1MR1 \| pdb_00001mr1	Download File View File

Crystal Structure of a Smad4-Ski Complex

Wu, J.-W., Krawitz, A.R., Chai, J., Li, W., Zhang, F., Luo, K., Shi, Y.

(2002) Cell 111: 357-367

Released	2003-01-21
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Homo sapiens
Macromolecule	Mothers against decapentaplegic homolog 4 (protein) Ski oncogene (protein)
Unique Ligands	ZN

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1NW9 \| pdb_00001nw9	Download File View File

STRUCTURE OF CASPASE-9 IN AN INHIBITORY COMPLEX WITH XIAP-BIR3

Shiozaki, E.N., Chai, J., Rigotti, D.J., Riedl, S.J., Li, P., Srinivasula, S.M., Alnemri, E.S., Fairman, R., Shi, Y.

(2003) Mol Cell 11: 519-527

Released	2003-03-25
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Baculoviral IAP repeat-containing protein 4 (protein) caspase 9, apoptosis-related cysteine protease (protein)
Unique Ligands	ZN

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1OZJ \| pdb_00001ozj	Download File View File

Crystal structure of Smad3-MH1 bound to DNA at 2.4 A resolution

Chai, J., Wu, J.-W., Yan, N., Massague, J., Pavletich, N.P., Shi, Y.

(2003) J Biological Chem 278: 20327-20331

Released	2004-03-23
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	SMAD 3 (protein) Smad binding element (nucleic acid)
Unique Ligands	ZN

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1Q4Q \| pdb_00001q4q	Download File View File

Crystal structure of a DIAP1-Dronc complex

Chai, J., Yan, N., Shi, Y.

(2003) Nat Struct Biol 10: 892-898

Released	2003-11-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Drosophila melanogaster
Macromolecule	Apoptosis 1 inhibitor (protein) Nedd2-like caspase CG8091-PA (protein)
Unique Ligands	ZN

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2G99 \| pdb_00002g99	Download File View File

Structural basis for the specific recognition of methylated histone H3 lysine 4 by the WD-40 protein WDR5

Chai, J., Han, Z., Wang, H., Shen, Y.

To be published

Released	2006-09-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Histone H3 (protein) WD-repeat protein 5 (protein)

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2G9A \| pdb_00002g9a	Download File View File

Structural basis for the specific recognition of methylated histone H3 lysine 4 by the WD-40 protein WDR5

Chai, J., Han, Z., Wang, H., Shen, Y.

To be published

Released	2006-09-06
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Histone H3 (protein) WD-repeat protein 5 (protein)

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2Z8M \| pdb_00002z8m	Download File View File

Structural basis for the catalytic mechanism of phosphothreonine lyase

Chen, L., Wang, H., Gu, L., Huang, N., Zhou, J.M., Chai, J.

(2008) Nat Struct Mol Biol 15: 101-102

Released	2007-12-18
Method	X-RAY DIFFRACTION 2 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	27.5 kDa virulence protein (protein)

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2Z8N \| pdb_00002z8n	Download File View File

Structural basis for the catalytic mechanism of phosphothreonine lyase

Chen, L., Wang, H., Gu, L., Huang, N., Zhou, J.M., Chai, J.

(2008) Nat Struct Mol Biol 15: 101-102

Released	2007-12-18
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	27.5 kDa virulence protein (protein)
Unique Ligands	SO4

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2Z8O \| pdb_00002z8o	Download File View File

Structural basis for the catalytic mechanism of phosphothreonine lyase

Chen, L., Wang, H., Gu, L., Huang, N., Zhou, J.M., Chai, J.

(2008) Nat Struct Mol Biol 15: 101-102

Released	2007-12-18
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	27.5 kDa virulence protein (protein)
Unique Ligands	TLA

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2Z8P \| pdb_00002z8p	Download File View File

Structural basis for the catalytic mechanism of phosphothreonine lyase

Chen, L., Wang, H., Gu, L., Huang, N., Zhou, J.M., Chai, J.

(2008) Nat Struct Mol Biol 15: 101-102

Released	2007-12-18
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	(GLY)(GLU)(ALA)(TPO)(VAL)(PTR)(ALA) (protein) 27.5 kDa virulence protein (protein)

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3CXB \| pdb_00003cxb	Download File View File

Crystal Structure of sifa and skip

Huang, Z., Chai, J.

(2008) Cell Host Microbe 4: 434-446

Released	2008-12-02
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	Pleckstrin homology domain-containing family M member 2 (protein) Protein sifA (protein)