7TII | pdb_00007tii


PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE

PGV is a Ligand Of Interest in 7TII designated by the Author


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter7TII_PGV_P_303Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter7TII_PGV_P_303Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter7TII_PGV_P_303Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
7TII_PGV_P_303 59% 82% 0.176 0.960.31 0.49 - -10100%1
7TII_PGV_A_606 48% 78% 0.223 0.9670.38 0.51 - -00100%1
7TII_PGV_P_301 47% 80% 0.224 0.9660.32 0.52 - -40100%1
7TII_PGV_C_303 46% 75% 0.212 0.9490.35 0.62 - 100100%1
7TII_PGV_A_607 15% 79% 0.257 0.8210.36 0.5 - -81100%1
7TII_PGV_C_308 7% 75% 0.275 0.7360.47 0.52 - -00100%1
7TII_PGV_Z_101 5% 70% 0.345 0.7470.39 0.77 - 140100%1
7TII_PGV_P_302 4% 80% 0.328 0.710.39 0.44 - -10100%1
5B1B_PGV_C_302 94% 56% 0.078 0.9790.81 0.87 1 130100%1
7YPY_PGV_P_302 94% 54% 0.079 0.9780.79 0.99 2 210100%1
5ZCQ_PGV_N_608 90% 32% 0.094 0.9781.15 1.53 5 810100%1
7VUW_PGV_A_608 90% 48% 0.096 0.9790.89 1.12 2 310100%1
6NKN_PGV_A_607 90% 43% 0.094 0.9760.85 1.34 2 500100%1
7VVR_PGV_A_609 89% 51% 0.1 0.9790.88 1.01 2 100100%1