NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5VTR designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5VTR_NAG_A_402 | 43% | 54% | 0.151 | 0.873 | 0.47 | 1.28 | - | 1 | 0 | 0 | 100% | 0.9333 |
5VTR_NAG_A_401 | 31% | 54% | 0.217 | 0.888 | 0.5 | 1.27 | - | 1 | 0 | 0 | 100% | 0.9333 |
5VTR_NAG_E_501 | 22% | 24% | 0.199 | 0.815 | 0.69 | 2.36 | - | 3 | 0 | 0 | 100% | 0.9333 |
5VTR_NAG_C_503 | 3% | 37% | 0.4 | 0.752 | 0.5 | 1.92 | - | 3 | 0 | 0 | 100% | 0.9333 |
3HMG_NAG_A_334 | 81% | 39% | 0.002 | 0.851 | 0.94 | 1.45 | - | 3 | 0 | 0 | 100% | 0.9333 |
4HMG_NAG_E_334 | 81% | 47% | 0.074 | 0.924 | 0.7 | 1.34 | - | 1 | 0 | 0 | 100% | 0.9333 |
1HGI_NAG_C_329 | 78% | 58% | 0.084 | 0.925 | 0.7 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_F_201 | 76% | 87% | 0.08 | 0.916 | 0.2 | 0.49 | - | - | 0 | 0 | 100% | 0.9333 |
2HMG_NAG_C_348 | 76% | 52% | 0.088 | 0.924 | 0.62 | 1.22 | - | 2 | 0 | 0 | 100% | 0.9333 |
3H0C_NAG_A_794 | 100% | 56% | 0.021 | 0.995 | 0.61 | 1.08 | - | 1 | 0 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
5O5D_NAG_A_601 | 100% | 65% | 0.022 | 0.994 | 0.32 | 0.99 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3GXM_NAG_A_498 | 100% | 45% | 0.026 | 0.992 | 0.75 | 1.34 | - | 2 | 0 | 0 | 100% | 0.9333 |