GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 5CNV designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5CNV_GDP_D_801 | 57% | 43% | 0.183 | 0.96 | 0.96 | 1.26 | 1 | 5 | 2 | 0 | 100% | 1 |
| 5CNV_GDP_C_801 | 39% | 42% | 0.259 | 0.969 | 0.99 | 1.24 | 2 | 4 | 1 | 0 | 100% | 1 |
| 5CNV_GDP_A_801 | 24% | 44% | 0.324 | 0.958 | 0.97 | 1.17 | 1 | 4 | 5 | 0 | 100% | 1 |
| 5CNV_GDP_B_801 | 20% | 42% | 0.312 | 0.914 | 0.94 | 1.28 | 1 | 4 | 3 | 0 | 100% | 1 |
| 4R1R_GDP_B_763 | 1% | 15% | 0.552 | 0.627 | 1.47 | 2.25 | 2 | 6 | 1 | 0 | 100% | 0.5 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 8YL3_GDP_A_201 | 100% | 57% | 0.035 | 0.99 | 0.89 | 0.75 | 2 | - | 0 | 0 | 100% | 1 |
