2P05 | pdb_00002p05


ADP: ADENOSINE-5'-DIPHOSPHATE

ADP is a Ligand Of Interest in 2P05 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2P05_ADP_A_100Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2P05_ADP_A_100Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2P05_ADP_A_100Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2P05_ADP_A_100 47% 26% 0.204 0.9461.16 1.81 2 1030100%1
3DGN_ADP_A_81 76% 31% 0.119 0.9551.14 1.61 3 420100%1
3LT8_ADP_A_81 68% 38% 0.133 0.9450.96 1.47 1 510100%1
3LT9_ADP_A_81 68% 38% 0.133 0.9450.96 1.47 1 510100%1
3LTD_ADP_A_82 67% 40% 0.144 0.9540.9 1.41 1 500100%1
3DGM_ADP_A_81 67% 35% 0.114 0.9231.04 1.52 1 610100%1
3KB1_ADP_A_301 100% 22% 0.021 0.9962.06 1.21 6 410100%1
3TW6_ADP_B_2000 100% 44% 0.019 0.9970.83 1.34 - 430100%1
5GZA_ADP_A_401 100% 2% 0.019 0.9973.36 3.39 13 1110100%1
5KHW_ADP_A_1201 100% 41% 0.023 0.9951.1 1.2 1 200100%1
8VZA_ADP_A_603 100% 37% 0.024 0.9950.96 1.51 1 500100%1