2J5M | pdb_00002j5m


MAN: alpha-D-mannopyranose

MAN is a Ligand Of Interest in 2J5M designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2J5M_MAN_A_1310Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2J5M_MAN_A_1310Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2J5M_MAN_A_1310Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2J5M_MAN_A_1310 87% 64% 0.091 0.9620.54 0.82 - 100100%1
2J5M_MAN_A_1309 71% 60% 0.127 0.9490.6 0.91 - 100100%1
2J5M_MAN_A_1308 66% 67% 0.097 0.90.57 0.71 - 100100%1
2J5M_MAN_A_1314 41% 62% 0.175 0.8920.57 0.88 - 100100%1
2J5M_MAN_A_1315 23% 61% 0.161 0.7810.57 0.9 - 100100%1
2J5M_MAN_A_1313 15% 65% 0.202 0.7660.61 0.72 - -00100%1
2J5M_MAN_A_1316 9% 59% 0.326 0.8180.54 1 - 100100%1
2J5M_MAN_A_1319 6% 62% 0.285 0.7190.6 0.84 - -00100%1
2J5M_MAN_A_1312 3% 64% 0.427 0.7880.58 0.8 - -00100%1
2J5M_MAN_A_1311 3% 58% 0.333 0.6560.56 1.03 - 100100%1
7RST_MAN_A_304 97% 61% 0.06 0.9780.65 0.82 - -00100%1
2CPO_MAN_A_741 97% 57% 0.043 0.960.44 1.2 - 100100%1
2CIZ_MAN_A_1308 97% 67% 0.052 0.9690.63 0.65 - -00100%1
2CIY_MAN_A_739 97% 52% 0.056 0.9690.74 1.09 - 100100%1
2J18_MAN_A_1309 97% 62% 0.065 0.9770.64 0.81 - 100100%1
5O2X_MAN_A_311 100% 66% 0.023 0.9950.37 0.94 - 100100%1
7C3C_MAN_A_401 100% 65% 0.039 0.9880.72 0.62 - -00100%1
1GAI_MAN_A_480 100% 75% 0.043 0.9860.45 0.53 - -00100%1
5M03_MAN_A_402 100% 59% 0.034 0.9890.56 0.99 - -0092%1
1GAH_MAN_A_479 99% 76% 0.05 0.9890.44 0.5 - -00100%1