7ADO | pdb_00007ado

Cryo-EM structure of human ER membrane protein complex in lipid nanodiscs


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyYidC transmembrane domain-like 8101852 3002720 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyEMC6/GET2-like 8101858 3002721 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
GCarboxypepD_rege7adoG1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Prealbumin-likeF: CarboxypepD_regECOD (1.6)
HF_UNCLASSIFIEDe7adoH1 A: a+b three layersX: Cytidine deaminase-like (From Topology)H: Cytidine deaminase-like (From Topology)T: Cytidine deaminase-likeF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF07774ER membrane protein complex subunit 1, C-terminal (EMC1_C)ER membrane protein complex subunit 1, C-terminalThis is the C-terminal domain of ER membrane protein complex subunit 1. ER membrane protein complex subunit 1 is a component of the ER membrane protein complex (EMC, composed of EMC1, EMC2, EMC3, EMC4, EMC5 and EMC6). In Saccharomyces cerevisiae, the ...Domain
PF22890EMC2 TPR-like repeat domain (TPR_EMC2)EMC2 TPR-like repeat domain- Repeat
PF01956Integral membrane protein EMC3/TMCO1-like (EMC3_TMCO1)Integral membrane protein EMC3/TMCO1-like- Family
PF07019EMC6 (EMC6)EMC6- Family
PF09430ER membrane protein complex subunit 7, beta-sandwich domain (EMC7_beta-sandw)ER membrane protein complex subunit 7, beta-sandwich domainThis is the beta-sandwich domain found in ER membrane protein complex subunit 7 (EMC7) [1,2], which is an integral membrane component of the EMC. EMC is widely conserved and involved in membrane protein biogenesis. It mediates the insertion into endo ...Domain
PF21203ER membrane protein complex subunit 10 (ECM10)ER membrane protein complex subunit 10- Family
PF10270Membrane magnesium transporter (MMgT)Membrane magnesium transporter- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
ER membrane protein complex subunit 1-
ER membrane protein complex subunit 2-
ER membrane protein complex subunit 3-
ER membrane protein complex subunit 4-
ER membrane protein complex subunit 6-
ER membrane protein complex subunit 7
ER membrane protein complex subunit 8-
ER membrane protein complex subunit 10-
J [auth K]Unassigned helix---
Membrane magnesium transporter 1

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B, C, D, E
OPMER membrane protein insertion complex

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
MemProtMDAnnotated as membrane protein by MemProtMD