Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth N]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8038258 3001831 SCOP2B (2022-06-29)
A [auth N]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8038259 3001831 SCOP2B (2022-06-29)
K [auth A]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8038258 3001831 SCOP2B (2022-06-29)
K [auth A]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8038259 3001831 SCOP2B (2022-06-29)
B [auth O]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8038263 3001831 SCOP2B (2022-06-29)
B [auth O]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8038260 3001831 SCOP2B (2022-06-29)
L [auth B]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8038260 3001831 SCOP2B (2022-06-29)
L [auth B]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8038263 3001831 SCOP2B (2022-06-29)
C [auth P]SCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8038264 3000966 SCOP2B (2022-06-29)
C [auth P]SCOP2B SuperfamilyTransmembrane di-heme cytochromes 8038265 3000517 SCOP2B (2022-06-29)
M [auth C]SCOP2B SuperfamilyTransmembrane di-heme cytochromes 8038265 3000517 SCOP2B (2022-06-29)
M [auth C]SCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8038264 3000966 SCOP2B (2022-06-29)
D [auth Q]SCOP2B SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 8038268 3000762 SCOP2B (2022-06-29)
D [auth Q]SCOP2B SuperfamilyCytochrome c 8038266 3000815 SCOP2B (2022-06-29)
N [auth D]SCOP2B SuperfamilyCytochrome c 8038266 3000815 SCOP2B (2022-06-29)
N [auth D]SCOP2B SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 8038268 3000762 SCOP2B (2022-06-29)
E [auth R]SCOP2B SuperfamilyISP transmembrane anchor 8038269 3000753 SCOP2B (2022-06-29)
E [auth R]SCOP2B SuperfamilyISP domain 8038267 3000233 SCOP2B (2022-06-29)
O [auth E]SCOP2B SuperfamilyISP transmembrane anchor 8038269 3000753 SCOP2B (2022-06-29)
O [auth E]SCOP2B SuperfamilyISP domain 8038267 3000233 SCOP2B (2022-06-29)
F [auth S]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8038272 3000797 SCOP2B (2022-06-29)
P [auth F]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8038272 3000797 SCOP2B (2022-06-29)
G [auth T]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8038274 3000770 SCOP2B (2022-06-29)
Q [auth G]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8038274 3000770 SCOP2B (2022-06-29)
H [auth U]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8038275 3000806 SCOP2B (2022-06-29)
R [auth H]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8038275 3000806 SCOP2B (2022-06-29)
J [auth W]SCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8037844 3000779 SCOP2B (2022-06-29)
T [auth J]SCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8037844 3000779 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth N]Peptidase_M16_Ce6fo0N1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
A [auth N]Peptidase_M16e6fo0N2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
K [auth A]Peptidase_M16_Ce6fo0A1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
K [auth A]Peptidase_M16e6fo0A2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
B [auth O]Peptidase_M16_Ce6fo0O2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
B [auth O]Peptidase_M16e6fo0O1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
L [auth B]Peptidase_M16_Ce6fo0B2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
L [auth B]Peptidase_M16e6fo0B1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
C [auth P]Cytochrom_B_Ce6fo0P2 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
C [auth P]Cytochrome_Be6fo0P1 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
M [auth C]Cytochrom_B_Ce6fo0C1 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
M [auth C]Cytochrome_Be6fo0C2 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
D [auth Q]Cytochrom_C1_Ne6fo0Q1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_NECOD (1.6)
D [auth Q]Cytochrom_C1_Ce6fo0Q2 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: Cytochrom_C1_CECOD (1.6)
N [auth D]Cytochrom_C1_Ne6fo0D2 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_NECOD (1.6)
N [auth D]Cytochrom_C1_Ce6fo0D1 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: Cytochrom_C1_CECOD (1.6)
E [auth R]Rieske_cytochrome_bc1,Rieske_6e6fo0R1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1,Rieske_6ECOD (1.6)
E [auth R]UCR_TMe6fo0R2 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
O [auth E]Rieske_cytochrome_bc1,Rieske_6e6fo0E2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1,Rieske_6ECOD (1.6)
O [auth E]UCR_TMe6fo0E1 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
F [auth S]UCR_14kDe6fo0S1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
P [auth F]UCR_14kDe6fo0F1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
G [auth T]UcrQe6fo0T1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
Q [auth G]UcrQe6fo0G1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
H [auth U]UCR_hingee6fo0U1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
R [auth H]UCR_hingee6fo0H1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
J [auth W]UCR_UQCRX_QCR9e6fo0W1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)
T [auth J]UCR_UQCRX_QCR9e6fo0J1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth N],
K [auth A]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
A [auth N],
K [auth A]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
B [auth O],
L [auth B]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
B [auth O],
L [auth B]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
C [auth P],
M [auth C]
PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petD- Domain
C [auth P],
M [auth C]
PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petB- Domain
D [auth Q],
N [auth D]
PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
E [auth R],
O [auth E]
PF02921Ubiquinol cytochrome reductase transmembrane region (UCR_TM)Ubiquinol cytochrome reductase transmembrane region- Family
E [auth R],
O [auth E]
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
G [auth T],
Q [auth G]
PF02939UcrQ family (UcrQ)UcrQ family- Family
H [auth U],
R [auth H]
PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge protein- Family
J [auth W],
T [auth J]
PF05365Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9)Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth N],
K [auth A]
Cytochrome b-c1 complex subunit 1, mitochondrial -
B [auth O],
L [auth B]
Cytochrome b-c1 complex subunit 2, mitochondrial
C [auth P],
M [auth C]
Cytochrome b
D [auth Q],
N [auth D]
Cytochrome c1, heme protein, mitochondrial
E [auth R],
O [auth E]
Cytochrome b-c1 complex subunit Rieske, mitochondrial
F [auth S],
P [auth F]
Cytochrome b-c1 complex subunit 7-
G [auth T],
Q [auth G]
Cytochrome b-c1 complex subunit 8-
H [auth U],
R [auth H]
Cytochrome b-c1 complex subunit 6, mitochondrial-
I [auth V],
S [auth I]
Chain I/V
J [auth W],
T [auth J]
Cytochrome b-c1 complex subunit 9-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth N],
K [auth A]
IPR007863Peptidase M16, C-terminalDomain
A [auth N],
K [auth A]
IPR011765Peptidase M16, N-terminalDomain
A [auth N],
K [auth A]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
A [auth N],
K [auth A]
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
B [auth O],
L [auth B]
IPR007863Peptidase M16, C-terminalDomain
B [auth O],
L [auth B]
IPR011765Peptidase M16, N-terminalDomain
B [auth O],
L [auth B]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
B [auth O],
L [auth B]
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
B [auth O],
L [auth B]
IPR001431Peptidase M16, zinc-binding siteBinding Site
C [auth P],
M [auth C]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
C [auth P],
M [auth C]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
C [auth P],
M [auth C]
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
C [auth P],
M [auth C]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
C [auth P],
M [auth C]
IPR005798Cytochrome b/b6, C-terminalDomain
C [auth P],
M [auth C]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
C [auth P],
M [auth C]
IPR030689Cytochrome bFamily
C [auth P],
M [auth C]
IPR005797Cytochrome b/b6, N-terminal domainDomain
D [auth Q],
N [auth D]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
D [auth Q],
N [auth D]
IPR002326Cytochrome c1Family
D [auth Q],
N [auth D]
IPR009056Cytochrome c-like domainDomain
D [auth Q],
N [auth D]
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
E [auth R],
O [auth E]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
E [auth R],
O [auth E]
IPR014349Rieske iron-sulphur proteinFamily
E [auth R],
O [auth E]
IPR011070Globular protein, non-globular alpha/beta subunitHomologous Superfamily
E [auth R],
O [auth E]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
E [auth R],
O [auth E]
IPR015248Ubiquinol-cytochrome c reductase iron-sulphur subunit, N-terminalDomain
E [auth R],
O [auth E]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
E [auth R],
O [auth E]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
E [auth R],
O [auth E]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
E [auth R],
O [auth E]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
F [auth S],
P [auth F]
IPR003197Cytochrome b-c1 complex subunit 7Family
F [auth S],
P [auth F]
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
G [auth T],
Q [auth G]
IPR004205Cytochrome b-c1 complex subunit 8Family
G [auth T],
Q [auth G]
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
H [auth U],
R [auth H]
IPR003422Cytochrome b-c1 complex, subunit 6Family
H [auth U],
R [auth H]
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
H [auth U],
R [auth H]
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
I [auth V],
S [auth I]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
I [auth V],
S [auth I]
IPR014349Rieske iron-sulphur proteinFamily
I [auth V],
S [auth I]
IPR011070Globular protein, non-globular alpha/beta subunitHomologous Superfamily
I [auth V],
S [auth I]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
I [auth V],
S [auth I]
IPR015248Ubiquinol-cytochrome c reductase iron-sulphur subunit, N-terminalDomain
I [auth V],
S [auth I]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
I [auth V],
S [auth I]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
I [auth V],
S [auth I]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
I [auth V],
S [auth I]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
J [auth W],
T [auth J]
IPR008027Cytochrome b-c1 complex subunit 9Family
J [auth W],
T [auth J]
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily